Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0656 ATGCAGTCTGTTTATCCTCGCCACTTGGAGATTCCAACTTTTATTAACCCAAGGTCTATGGAGAAGGAGGCTAAAGCTGCTCAGTTGACTATCTTCTATGATGGGCAAGTTGTTGTGTTTGATGATTTTCCTGCTGATAAAGTGCAGGAGACGAAGATGGCTACTGCAGCAGGTGCAGTTGCCCTTTTGTACTACACATTGAATCGGAAATTGCAGACTCACGATGTAATTGATGAAGATGGTGAAGAAAATGGGAGTGATTCGCCAGCTGATACGCCATTAGGTATTGGCTGTGTTTCTCATCGGTTAATCCAAGCCCCTGCAACATGGTTGGAGACAATTTCTACATTGTCAGAAACTCTCAGGTTCACTTATTCGGAGACACTTGGGAAGTGGCCAATTAGGGATTTGGCGTTTGGTATCAACTTTCTTCTAAAGCGGCAGGGAAACTATCATGTGGGCAGTGAATTTTGTGGTAAGGACAGTGTACAGCTGAAAGGATCTGAAATTACTGCTGAACTTAAGTATCTCTTAAACTTGTTGACATTGTGTTGGCACTTTTCAAAGAAGCCCTTTCCCTTGTTTTTAGAAGAAACTGGCTACACTGAAGAAAACGTTCTCCTTCGAGAAGCAAAAGCAGGAATTTTGAAACCAACTTTTACAATAATAGCTTATCACAAGATGGGATGCCTTTTGTTATTGATTCGTGGCACGCATAATATCAAGGATACTTTAACAACTGTTACTGGAAATGTGGTACCATTTCATCACATTGTTGTTAATCTGGGGGGTGTCAGTGATTTGGTTTTAGGTTATGCACATTGTGGAATGGTTGCTGCTGCTCGATGGATTGCAAAGCTCGCAACTCCTTGTCTCCTTGAAGCACTTGGCCACTACCCTGACTATAAAGTTAAGATTGTAGGGCACTCTTTGGGTGGAGGAACTGCCGCAATTCTAACTTATGTGTTGAGAGAGAGAAAGGAACTGCCCGTAACCACGTGCATTACATTTGCTCCAGCTGCTTGTATGACATAG 1035 0.4251 MQSVYPRHLEIPTFINPRSMEKEAKAAQLTIFYDGQVVVFDDFPADKVQETKMATAAGAVALLYYTLNRKLQTHDVIDEDGEENGSDSPADTPLGIGCVSHRLIQAPATWLETISTLSETLRFTYSETLGKWPIRDLAFGINFLLKRQGNYHVGSEFCGKDSVQLKGSEITAELKYLLNLLTLCWHFSKKPFPLFLEETGYTEENVLLREAKAGILKPTFTIIAYHKMGCLLLLIRGTHNIKDTLTTVTGNVVPFHHIVVNLGGVSDLVLGYAHCGMVAAARWIAKLATPCLLEALGHYPDYKVKIVGHSLGGGTAAILTYVLRERKELPVTTCITFAPAACMT* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0656 344 Pfam tify domain 24 50 IPR010399 -
Gso16g0656 344 Pfam Lipase 3 N-terminal region 99 177 IPR005592 GO:0016042
Gso16g0656 344 Gene3D alpha/beta hydrolase 194 344 IPR029058 -
Gso16g0656 344 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 51 344 - -
Gso16g0656 344 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 51 344 - -
Gso16g0656 344 SUPERFAMILY alpha/beta-Hydrolases 192 342 IPR029058 -
Gso16g0656 344 SMART tify_2 22 58 IPR010399 -
Gso16g0656 344 Pfam Lipase (class 3) 233 343 IPR002921 GO:0006629
Gso16g0656 344 CDD Lipase_3 226 343 - -
Gso16g0656 344 ProSiteProfiles Tify domain profile. 22 57 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0656 Gso-Chr16 8834314 8839680 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0656 62 344 Acyl Lipid Metabolism Gene Families AT3G14075 73.684 1.79e-137 403
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Gso16g0656 Lipase_3 4.4e-18 CL0028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0656 - - gsj:114390323 699.893