Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0639 ATGGTTCTGCATAGCTGGATTTCCAGCTCTCATATTCTTGTTAATTTCTTGCTGCTGCTTGGTTGTGGCATAACCTACGGGACTGACACTGATATCTTCTGCTTGAAAAGTATCAAAGAATCCCTTGAAGACCCCTATAATTATTTGAAGTTCTCTTGGGATTTCAACAACAAAACTGAAGGGTATATCTGCAGGTTTAATGGGGTTGAGTGTTGGCACCCTGACGAGAACAGGGTCTTGAATCTCAAACTGTCGAATATGGGACTCAAGGGCCAGTTTCCTCGCGGCATTCAAAATTGCTCGAGCTTAACTGGATTAGACCTTTCAATTAACAAACTCTCTGGAACCATTCCGGGAGACATATCCACTCTTATACCATTTGCGACGTCTATTGATCTATCTACAAATGAGTTTTCTGGGGCAATTCCCGTGAGTCTTGCGAATTGTACCTTTCTTAATACCCTTAAACTTGATCAGAATCGACTCACTGGCCAAATTCCTCCACAATTTGGTGTTCTCTCACGAATTAAGGTATTTTCTGTATCCAACAATCTTTTGACGGGGCAAGTTCCAATCTTTAGGGATGGGGTTGAGTTACATTATGCAAATAATCAAGGCCTATGTGGAGGAAATACATTGGCGCCTTGCCAAGCCACGCCTTCCAAGAGTAACATGGCTGTTATTGCTGGAGCTGCTGCTGGCGGGGTGACTCTTGCGGCATTAGGATTGGGTATTGGAATGTTCTTCTTTGTGCGACGTGTTTCTTTCAAGAAGAAGGAAGAGGATCCTGAAGGAAACAAATGGGCAAGAAGTCTAAAAGGAACTAAACGAATTAAGGTTTCTATGTTTGAGAAATCAATTTCAAAAATGAAATTGAGTGATCTCATGAAGGCTACTAACAACTTCAGTAATACCAATATCATTGGGACAGGAAGAACAGGAACTGTTTACAAAGCTGTCCTTGACGATGGCACAACTCTTATGGTTAAGAGATTACAGGAATCTCAGTACACTGAAAAAGAATTTATGTCTGAGATGGGTACGCTAGGTACTGTCAAACATCGCAATCTGGTTCCTCTTTTAGGTTTTTGTATGACCAAAAGGGAGAGGCTTTTGGTCTATAAAAACATGCCAAATGGCAACCTCCATGACCAACTCCATCCCGCTGATGGTGTGAGCACCCTTGACTGGACTACAAGGCTCAAAATTGCAATTGGAGCAGCCAAAGGGTTAGCATGGCTTCATCATAGCTGCAATCCCCGTATCATCCACCGAAACATAAGCTCGAAGTGCATCTTGTTGGATGCAGATTTTGAGCCAAAAATTTCTGATTTCGGCCTTGCTAGACTGATGAATCCAATTGATACTCATTTGAGTACTTTTGTAAATGGGGAGTTTGGAGATTTAGGTTATGTTGCTCCTGAGTACACAAGAACTTTGGTTGCTACACCTAAAGGGGATATTTACAGCTTTGGAACTGTTCTTCTTGAGTTGGTGACAGGTGAAAGACCTACCAATGTGTCTAAAGCTCCGGAAACTTTTAAAGGAAATCTGGTAGAATGGATTACGGAGCTCACAAGCAATGCAAAACTCCATGATGCCATTGATGAATCACTAGTCAGAAAGGATGTTGATAGTGAGCTTTTCCAATTTCTAAAGGTTGCATGCAACTGTGTCTCACCAACTCCAAAGGAGAGGCCCACCATGTTTGAAGTGTATCAGCTTTTAAGAGCTATTGGGGGTAGATACAATTTCACAACTGAGGATGATATATTGGTACCTACTGATATTGGTAATACTGATAACATGCAGGAACTTATTGTAGCCCAAGAAGGAAGTTATTGA 1845 0.4163 MVLHSWISSSHILVNFLLLLGCGITYGTDTDIFCLKSIKESLEDPYNYLKFSWDFNNKTEGYICRFNGVECWHPDENRVLNLKLSNMGLKGQFPRGIQNCSSLTGLDLSINKLSGTIPGDISTLIPFATSIDLSTNEFSGAIPVSLANCTFLNTLKLDQNRLTGQIPPQFGVLSRIKVFSVSNNLLTGQVPIFRDGVELHYANNQGLCGGNTLAPCQATPSKSNMAVIAGAAAGGVTLAALGLGIGMFFFVRRVSFKKKEEDPEGNKWARSLKGTKRIKVSMFEKSISKMKLSDLMKATNNFSNTNIIGTGRTGTVYKAVLDDGTTLMVKRLQESQYTEKEFMSEMGTLGTVKHRNLVPLLGFCMTKRERLLVYKNMPNGNLHDQLHPADGVSTLDWTTRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPKISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTRTLVATPKGDIYSFGTVLLELVTGERPTNVSKAPETFKGNLVEWITELTSNAKLHDAIDESLVRKDVDSELFQFLKVACNCVSPTPKERPTMFEVYQLLRAIGGRYNFTTEDDILVPTDIGNTDNMQELIVAQEGSY* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0639 614 CDD STKc_IRAK 308 576 - -
Gso16g0639 614 PANTHER LRR RECEPTOR-LIKE KINASE 3 591 - -
Gso16g0639 614 Gene3D Ribonuclease Inhibitor 29 218 IPR032675 -
Gso16g0639 614 ProSiteProfiles Protein kinase domain profile. 302 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0639 614 SUPERFAMILY L domain-like 33 195 - -
Gso16g0639 614 Gene3D Phosphorylase Kinase; domain 1 263 375 - -
Gso16g0639 614 Gene3D Transferase(Phosphotransferase) domain 1 377 591 - -
Gso16g0639 614 Pfam Protein kinase domain 304 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0639 614 SUPERFAMILY Protein kinase-like (PK-like) 280 576 IPR011009 -
Gso16g0639 614 PANTHER RECEPTOR-LIKE PROTEIN 55 3 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0639 Gso-Chr16 8196411 8199968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0639 13 590 Receptor kinase-like Gene Family AT3G28450 45.470 8.15e-179 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Gso16g0639 Pkinase 2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0639 - - gmx:100305365 1110.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0639 16 8196411 8199968 Gso3g0824 3 30159204 30160181 GST