Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0636 ATGGAATTATTCACTCCACCATGTCTTAAATTGTTATTTCACTCTCTTGTGATCTTATTCTTGCTCTTTAACCATGCAAACACTCAGTCTCAGTCTCAGTTGCATGATCAAGAACGTGCAACCTTACTGAAGATAAAGGAATACCTTGAAAACCCCGAATTCCTCAGTCACTGGACTACTTCATCAAGCTCCTCTCACTGCTCATGGCAAGAGATAAAATGCAGCAATGGTTCAGTAACTGGATTGACTTTGTCCAACAGCAGCATCACTCAAACCATACCCTCTTTCGTATGTGACCTCAAAAACCTCACAATTGTTGATTTCTACAACAATTTGATTCCTGGGGAGTTCCCAACATCTCTCTACAATTGCTCCAAGTTGGAGTACCTAGACCTGTCTCAGAACAACTTTGTTGGCAGCATTCCTCATGACATTGGAAACCTCTCTAATTATTTGAAGTATCTCAACCTTGGTTACACGAATTTCTCTGGTGACATTCCTGCTAGCATTGGAAGGCTTAAGGAACTTAGAAATCTTCAACTTCAAAATAATCTATTGAATGGAACATTCCCTGCTGAGATTGGCAACTTGTCCAATCTTGACACCTTGGACTTGTCCTCTAACAACATGCTTCCTCCTTCGAAGTTGCACGGTGACTGGACCCGGTTGAACAAGTTGAAGGTTTTTTTCATGTTTCAGTCCAACTTGGTTGGGGAGATCCCACAAACCATTGGAAACATGGTGGCTTTGGAGAGATTAGATCTATCGCAAAACAATTTGAGTGGACCAATTCCTAGCGGTTTGTTCATGCTGGAGAATCTGAGCATAATGTTTCTATCTAGAAACAATCTTTCTGGGGAAATACCTGATGTGGTTGAAGCATTGAATTTGACCATCATTGATCTCACACGGAATGTTATCTCAGGAAAAATACCAGATGGTTTTGGAAAGCTCCAAAAGCTAACCGGTTTGGCTTTGTCTATGAATAACTTGCAAGGGGAGATACCAGCAAGCATAGGACTTCTTCCATCTCTGGTAGATTTTAAAGTATTTTTCAACAATTTATCAGGTATTCTCCCTCCTGATTTTGGTCGCTACTCAAAGCTTGAAACATTTTTGGTTGCAAATAATAGTTTTAGAGGAAACCTACCAGAGAACTTATGCTATAATGGTCACCTTCTTAACATCTCTGCCTATATAAATTATCTGAGTGGGGAGTTGCCACAATCACTTGGGAATTGTAGTAGCCTGATGGAACTGAAAATCTATAGCAATGAGTTTTCTGGTAGCATTCCTAGTGGTCTTTGGACTTTAAGCTTGTCAAATTTCATGGTGAGTTATAATAAGTTCACTGGTGAGCTTCCTGAGAGATTGTCCCCAAGTATTTCGCGCTTGGAGATAAGTCACAATCGGTTTTTTGGTAGGATTCCAACTGATGTATCTTCATGGACTAATGTGGTTGTTTTTATAGCAAGTGAGAACAACCTTAATGGGAGTGTTCCAAAAGGTTTAACATCTCTTCCCAAGCTAACAACTCTATTGCTTGATCATAACCAGCTCACAGGGCCACTTCCATCAGATATCATATCATGGCAATCCCTTGTAACTCTAAATTTGAGCCAAAACAAACTCTCTGGACATATCCCAGATTCAATTGGTCTGTTACCCGTCCTTGGCGTACTCGACCTGTCAGAAAATCAATTCTCTGGTGAAGTTCCTTCTAAACTTCCCAGAATCACCAATCTCAATCTATCCTCCAATTATTTGACAGGGAGGGTTCCAAGTCAATTTGAAAATCTTGCTTATAACACAAGCTTTTTGGACAATTCTGGCCTATGTGCTGATACCCCAGCACTGAACCTCAGGTTGTGTAATTCTAGCCCTCAAAGGCAAAGCAAGGACTCATCTTTGTCTCTTGCTTTGATTATAAGCCTTGTGGCAGTGGCCTGCTTCCTGGCTTTGTTGACATCACTCTTGATCATCAGATTTTATAGAAAAAGAAAGCAAGGATTGGATAGATCATGGAAGCTCATTTCCTTCCAAAGGCTGAGTTTCACTGAATCAAACATAGTGTCATCACTGACAGAAAATAGTATTATTGGCAGTGGTGGATATGGCACAGTATACCGTGTTGCAGTTGATGGTTTAGGCTATGTTGCTGTGAAGAAGATTTGGGAACACAAGAAGTTGGACAAGAATCTTGAGAGCTCATTTCATACAGAAGTTAAGATATTGAGCAACATTCGTCACAAAAACATTGTCAAATTGATGTGCTGTATCTCTAATGAGGACTCTATGCTCCTTGTCTATGAGTATGTGGAAAACCATAGCCTTGACAGGTGGCTGCACCGGAAAAATAAGTCATCAACCGTGTCAGGTTCAGTCCATCATATTGTCCTTGATTGGCCAAAGAGATTGCATATAGCCATTGGAGCTGCACAAGGTTTGAGCTACATGCATCATGATTGCTCACCACCTATTGTTCATCGAGATGTGAAAACAAGCAACATTCTTTTGGATTCTCAATTCAATGCAAAAGTTGCTGATTTTGGTCTGGCTAGGATGTTAATGAAGCCAGGGGAACTTGCCACCATGTCATCCGTGATTGGCTCATTTGGCTATATGGCTCCAGAATATGTTCAAACAACTCGAGTCAGTGAAAAGATTGATGTCTTCAGCTTTGGAGTTATGCTATTGGAACTGACAACTGGTAAGGAAGCTAATTATGGTGATGAGCACTCATCTCTTGCAGAGTGGGCGTGGCGACATCAGCAGTTAGGAAGCAACATAGAAGAGCTGCTAGATAAGGATGTCATGGAAACCAGTTACTTGGATGGAATGTGTAAGGTTTTCAAACTCGGGATCATGTGCACCGCAACACTTCCTTCTAGTAGACCTTCCATGAAGGAGGTTCTACGAGTATTGCTTTCTTGTGAAGATTCATTTTCTAAAGGAGAGAGTATTATTGGCCACTATGATGATGTTCCCCTTCTTAAAAATTCAAAAAGAGAGCATAAGTTGGATATTGATAATGATAGCTAG 3042 0.4066 MELFTPPCLKLLFHSLVILFLLFNHANTQSQSQLHDQERATLLKIKEYLENPEFLSHWTTSSSSSHCSWQEIKCSNGSVTGLTLSNSSITQTIPSFVCDLKNLTIVDFYNNLIPGEFPTSLYNCSKLEYLDLSQNNFVGSIPHDIGNLSNYLKYLNLGYTNFSGDIPASIGRLKELRNLQLQNNLLNGTFPAEIGNLSNLDTLDLSSNNMLPPSKLHGDWTRLNKLKVFFMFQSNLVGEIPQTIGNMVALERLDLSQNNLSGPIPSGLFMLENLSIMFLSRNNLSGEIPDVVEALNLTIIDLTRNVISGKIPDGFGKLQKLTGLALSMNNLQGEIPASIGLLPSLVDFKVFFNNLSGILPPDFGRYSKLETFLVANNSFRGNLPENLCYNGHLLNISAYINYLSGELPQSLGNCSSLMELKIYSNEFSGSIPSGLWTLSLSNFMVSYNKFTGELPERLSPSISRLEISHNRFFGRIPTDVSSWTNVVVFIASENNLNGSVPKGLTSLPKLTTLLLDHNQLTGPLPSDIISWQSLVTLNLSQNKLSGHIPDSIGLLPVLGVLDLSENQFSGEVPSKLPRITNLNLSSNYLTGRVPSQFENLAYNTSFLDNSGLCADTPALNLRLCNSSPQRQSKDSSLSLALIISLVAVACFLALLTSLLIIRFYRKRKQGLDRSWKLISFQRLSFTESNIVSSLTENSIIGSGGYGTVYRVAVDGLGYVAVKKIWEHKKLDKNLESSFHTEVKILSNIRHKNIVKLMCCISNEDSMLLVYEYVENHSLDRWLHRKNKSSTVSGSVHHIVLDWPKRLHIAIGAAQGLSYMHHDCSPPIVHRDVKTSNILLDSQFNAKVADFGLARMLMKPGELATMSSVIGSFGYMAPEYVQTTRVSEKIDVFSFGVMLLELTTGKEANYGDEHSSLAEWAWRHQQLGSNIEELLDKDVMETSYLDGMCKVFKLGIMCTATLPSSRPSMKEVLRVLLSCEDSFSKGESIIGHYDDVPLLKNSKREHKLDIDNDS* 1014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0636 1013 Pfam Leucine rich repeat N-terminal domain 35 75 IPR013210 -
Gso16g0636 1013 CDD STKc_IRAK 700 975 - -
Gso16g0636 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 827 839 IPR008271 GO:0004672|GO:0006468
Gso16g0636 1013 SUPERFAMILY RNI-like 234 608 - -
Gso16g0636 1013 Pfam Leucine rich repeat 80 137 IPR001611 GO:0005515
Gso16g0636 1013 Pfam Protein kinase domain 696 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0636 1013 SUPERFAMILY L domain-like 35 294 - -
Gso16g0636 1013 Gene3D Ribonuclease Inhibitor 301 620 IPR032675 -
Gso16g0636 1013 Gene3D Ribonuclease Inhibitor 153 214 IPR032675 -
Gso16g0636 1013 Gene3D Transferase(Phosphotransferase) domain 1 773 990 - -
Gso16g0636 1013 ProSitePatterns Protein kinases ATP-binding region signature. 700 723 IPR017441 GO:0005524
Gso16g0636 1013 Gene3D Phosphorylase Kinase; domain 1 671 772 - -
Gso16g0636 1013 Gene3D Ribonuclease Inhibitor 215 300 IPR032675 -
Gso16g0636 1013 SUPERFAMILY Protein kinase-like (PK-like) 688 975 IPR011009 -
Gso16g0636 1013 ProSiteProfiles Leucine-rich repeat profile. 533 555 IPR001611 GO:0005515
Gso16g0636 1013 SMART LRR_typ_2 173 197 IPR003591 -
Gso16g0636 1013 SMART LRR_typ_2 555 583 IPR003591 -
Gso16g0636 1013 SMART LRR_typ_2 318 342 IPR003591 -
Gso16g0636 1013 SMART LRR_typ_2 507 531 IPR003591 -
Gso16g0636 1013 SMART LRR_typ_2 247 271 IPR003591 -
Gso16g0636 1013 SMART LRR_typ_2 124 148 IPR003591 -
Gso16g0636 1013 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 13 1006 - -
Gso16g0636 1013 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 13 1006 - -
Gso16g0636 1013 SMART serkin_6 694 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0636 1013 ProSiteProfiles Protein kinase domain profile. 694 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0636 1013 Gene3D Ribonuclease Inhibitor 36 152 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0636 Gso-Chr16 8129832 8133653 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0636 32 975 Receptor kinase-like Gene Family AT5G25930 51.786 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso16g0636 Pkinase 6.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0636 - - gmx:100820277 1962.19