Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0621 ATGGTCTTTGGCAAGAACAACAACCACCACCTCCGAATCTCCTCCTCCCTCCAAGATCTCTCCTCCTATCGCCATGACCTCGAACATGGCCATGGCCATGGCCCCACTCCCGACAACAACATCAACAACACCAACTTCACCTCCTCCAGTTTCTCCAAAACCAAACCGGTTCAACTTCCCAATCCGGTACGCCGCAAACACCTCTTCCTCTTCCTCTTCCTGATCCTCATCCTCTTCCTTTTCCTCCTCCTCCTCTTTTTCCTCTACACTCTCTACTCCCACCACTCCTCCCCCAAATACTACGTCGTTCTCGACTGCGGCAGCACCGGGACACGTGTCTACGTCTACAAGGCCCAAATCCAACACAATGACCAAAAAGCCACCCTCCCAATCTCCATCGAATCACTAAAGGACGGCCTTCGCAAGAACCCTTCTAGCGGTCGCGCCTACGACCGCATGGAAACTGAACCGGGCCTCGACAAACTGCTCCACAACCGAACCGGTTTAAAAACCGCCCTCGAACCGCTTCTCAAATGGGCGCAGAAGCAGATTCCAGAAACCTCCCACAAAACCACTTCTTTATTCCTCTACGCCACCGCAGGGGTTCGGAGACTCCCCTTCGACGATTCGAAATGGTTGCTCGACAACGCGTGGAGCTTTCTCAAGAGTTCTTCGCCGTTCGTGTGCAAAAGGGATTGGGTGAAGATCATTTCGGGGACCGAAGAGGCTTACTTGGGATGGATTGCGCTTAACTACGATTCAGGTATTCTCGGTGTTAAGCCAAGGAAAGAAACCTACGGTGCTCTTGATTTGGGAGGGTCTTCATTGCAGGTCACGTTTGAGGGGAATAGAAATAAGGAGCAGCAAAATCAACAGTTATTGAATAGTGAGACTAGTTTGTATGTTAGGATTGGCTCTATGAACCATCATTTGACGGCGTATTCGCTTGCGGGTTACGGGCTTAACGAGGCGTTTGATAAGTCTGTTGCTTATGTTTTTAAGAAATATGGGTATGGTATGGAGGATGTATTTAAGGGGAATGTGGAGGTTAATCATCCCTGCTTGCAATCCGGGTACAAGGAGAGGTATTCGTGCTCACATTGTTCGAATGCTGTGAAGAAAGGAGGGGAGAGTCCGACAGTCGAGGGGAATGGGAATGTGTTGGGGAAGAAGGATGGAGGATTGAGGACTGTGGTGACACTCATTGGTGCGCCAAATTGGCTGGAGTGCAGCGCGCTGGCGAAGGTGGCTGTGAATTTGTCTGAGTGGAGTGATGTTAGGCCTGGGATGGATTGCGAGGTTCACCCGTGTGCCCTTCGCGATAACTTGCCCCGCCCAATGGGGCACTTTTATGTGATTTCTGGGTTCTTTGTGGTGTACCGGTTTTTCAATTTGACTGCAGAGGCCACACTTGAGGATGTGTTGGAGAAGGGGAGGGAGTTCTGTGAGAAGAGATGGGATGTTGCGAGGAAGAGTGTCGCTCCTCAGCCGTTTATTGAGCAGTATTGCTTCAGGGCACCGTATATTGCATCGTTGCTGAGGGAGGGTTTGCACATTACTGATAAGCATATAACTGTTGGCTCTGGAAGCATCACTTGGACGCTTGGGGTGGCCTTGTTGGAAGCTGGGAAGGCATATTCGGTTAGGTTTGGGCTCCATGGTTTTGACTTGCTTCAGATGAAGATGAATCCATTGATTCTTATTCCCATTTTGATACTTACTTTCATTCTTCTGCTTTGTGCTTTGTCATGGGTTGTCAATTGGATGCCAAGATTTTTCCGGAGGCAGTATCTTCCTTTATTCAGGCATAACAGTGGATCCAGTGCATCTGGTATTAATATCGCATCTCCTTTCCGGTTTCAGCGGTGGAGTCCTATGAATTCTGGAGATGGAAGAATAAAGACCCCACTCAGCCCAACAATTGCAGGTTCACAGGATAGACCGTTTCGCCTGGGGCATGGTCTTGGTGATAACAGTGGCAACATCCAGCTGATGGAATCTTCCTTTTACCCATCAGCTAGTAGTGTCTCACATAGTTATTCCTCGAACAATTTAGGGCAGATGCAGTTCGACAGCAGTAGTATAGGGGCATTCCGGTCACCCCACAGAAGTCAGATGCGTCTGCAGAGTAGGAGATCTCAATCTCGAGAAGACCTGAATTCTTCATTGGCCGAGACACACATAGTGAAGGTTTAG 2196 0.4932 MVFGKNNNHHLRISSSLQDLSSYRHDLEHGHGHGPTPDNNINNTNFTSSSFSKTKPVQLPNPVRRKHLFLFLFLILILFLFLLLLFFLYTLYSHHSSPKYYVVLDCGSTGTRVYVYKAQIQHNDQKATLPISIESLKDGLRKNPSSGRAYDRMETEPGLDKLLHNRTGLKTALEPLLKWAQKQIPETSHKTTSLFLYATAGVRRLPFDDSKWLLDNAWSFLKSSSPFVCKRDWVKIISGTEEAYLGWIALNYDSGILGVKPRKETYGALDLGGSSLQVTFEGNRNKEQQNQQLLNSETSLYVRIGSMNHHLTAYSLAGYGLNEAFDKSVAYVFKKYGYGMEDVFKGNVEVNHPCLQSGYKERYSCSHCSNAVKKGGESPTVEGNGNVLGKKDGGLRTVVTLIGAPNWLECSALAKVAVNLSEWSDVRPGMDCEVHPCALRDNLPRPMGHFYVISGFFVVYRFFNLTAEATLEDVLEKGREFCEKRWDVARKSVAPQPFIEQYCFRAPYIASLLREGLHITDKHITVGSGSITWTLGVALLEAGKAYSVRFGLHGFDLLQMKMNPLILIPILILTFILLLCALSWVVNWMPRFFRRQYLPLFRHNSGSSASGINIASPFRFQRWSPMNSGDGRIKTPLSPTIAGSQDRPFRLGHGLGDNSGNIQLMESSFYPSASSVSHSYSSNNLGQMQFDSSSIGAFRSPHRSQMRLQSRRSQSREDLNSSLAETHIVKV* 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0621 731 Gene3D - 89 238 - -
Gso16g0621 731 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 32 703 IPR000407 GO:0016787
Gso16g0621 731 PANTHER GDA1/CD39 NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN 32 703 - -
Gso16g0621 731 MobiDBLite consensus disorder prediction 695 731 - -
Gso16g0621 731 MobiDBLite consensus disorder prediction 28 47 - -
Gso16g0621 731 Pfam GDA1/CD39 (nucleoside phosphatase) family 95 540 IPR000407 GO:0016787
Gso16g0621 731 Gene3D Exopolyphosphatase. Domain 2 239 528 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0621 Gso-Chr16 7892579 7900114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0621 11 731 Nodulin-like Gene Family AT4G19180 58.231 0.0 781
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0621 - - gmx:100816548 1363.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1317 1 49731104 49734868 Gso16g0621 16 7892579 7900114 PCT
Gso11g0757 11 6825305 6828919 Gso16g0621 16 7892579 7900114 PCT
Gso16g0621 16 7892579 7900114 Gso1g1317 1 49731104 49734868 PCT
Gso16g0621 16 7892579 7900114 Gso11g0757 11 6825305 6828919 PCT