Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0613 ATGGAACTCAGCACTATTATGTTGTGCTTGTTTGCTTCTTTCCTATCCATTCTTCTGTTCAAATCACTCATCAAACCTTTCTTCTTCTCTTCCAAAGGGAGACAATTGCCACTTCCTCCTGGGACCATGGGTTTGCCTTACATAGGAGAAACCTTCCAAATGTATTCTCAAGACCCAAATGTTTTTTTTGCCACAAAAATCAAGAGGTATGGCTCCATGTTTAAGTCACACATTTTGGGTTATCCTTGTGTGATGATTTCTGACCCAGAAGCAGCAAAGTTTGTGCTGAACAAAGCTCAACTCTTCAAACCAACATTTCCTGCAAGCAAAGAGAGGATGTTGGGAAAGCAAGCAATTTTCTTTCACCAAGGAGCATACCATGCTAACCTTAGAAAGCTTGTTCTTCGCACCTTCATGCCTGAGGCCATCAAAGACAAAGTCTCTAACATTGAATCCATTGCCCTAAGTTGCCTCAAATCATGGGAAGGAAAAATGATCACAACTTTCCTTGAAATGAAAACCTTTACCTTCAATGTGGCCCTGCTTTCAATTTTTGGAAAGGATGAAAACCTCTATGGAGAAGCTCTGAAGAGATGCTACTGCACCCTCGAGAGAGGGTACAATTCAATGCCAATAAACCTTCCAGGAACACTGTTCCACAAGGCCATGAAGGCAAGGAAAGAGCTTGCACAGATCTTGGCTCAAATCATCTCAACAAGGAGGAACATGAAGCAAGATCACAACAACGACTTGTTGGGCTCGTTCATGAGTGAAAAAGCAGGACTCACTGATGAGCAAATAGCAGATAACATCATTGGTGCTATTTTCGCTGCTCGTGACACCACTGCCACTGTACTTACTTGGATTGTTAAGTACCTTGGTGAAAATCCGAGTGTCCTAGAAGCTGTAACTGAAGAGCAAGAGTCCTTATTAAGAGGCAAGGAAGAAAGTGGAGAAAAAATGGGTCTGAATTGGTCAGACACAAAAAATATGCCAGTGACATCCAGGGTGATACAAGAGACTCTAAGAATAGCATCAATTTTGTCTTTTACTTTCAGAGAAGCTGTAGAGGATGTTGAATTTCAAGGGTATCTCATACCAAAAAGATGGAAAGTATTACCCCTTTTTAGAAACATCCACCACAGTCCAGACAACTTCAAAGAGCCAGAGAAGTTTGATCCTTCAAGATTTGAGGTTGCTCCAAAACCCAATACTTTTATGCCATTTGGCAATGGGACACGTGCATGTCCTGGCAATGAATTAGCCAACTTGGAGATTTTGGTGTTTTTACATCACCTAACCACAAAATACAGGTGGTCTTTGATAGGTGCAAAAAATGGGATTCAATATGGCCCTTTTGCCATTCCACAGAATGGATTGCCCATAACACTATATCCCAAGAATTAA 1407 0.4129 MELSTIMLCLFASFLSILLFKSLIKPFFFSSKGRQLPLPPGTMGLPYIGETFQMYSQDPNVFFATKIKRYGSMFKSHILGYPCVMISDPEAAKFVLNKAQLFKPTFPASKERMLGKQAIFFHQGAYHANLRKLVLRTFMPEAIKDKVSNIESIALSCLKSWEGKMITTFLEMKTFTFNVALLSIFGKDENLYGEALKRCYCTLERGYNSMPINLPGTLFHKAMKARKELAQILAQIISTRRNMKQDHNNDLLGSFMSEKAGLTDEQIADNIIGAIFAARDTTATVLTWIVKYLGENPSVLEAVTEEQESLLRGKEESGEKMGLNWSDTKNMPVTSRVIQETLRIASILSFTFREAVEDVEFQGYLIPKRWKVLPLFRNIHHSPDNFKEPEKFDPSRFEVAPKPNTFMPFGNGTRACPGNELANLEILVFLHHLTTKYRWSLIGAKNGIQYGPFAIPQNGLPITLYPKN* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0613 468 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 409 418 IPR017972 GO:0005506|GO:0016705
Gso16g0613 468 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0613 468 PRINTS E-class P450 group I signature 266 283 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0613 468 PRINTS E-class P450 group I signature 286 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0613 468 PRINTS E-class P450 group I signature 335 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0613 468 PRINTS E-class P450 group I signature 375 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0613 468 PRINTS E-class P450 group I signature 406 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0613 468 PRINTS E-class P450 group I signature 416 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0613 468 SUPERFAMILY Cytochrome P450 34 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0613 468 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 12 465 - -
Gso16g0613 468 PRINTS P450 superfamily signature 277 294 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0613 468 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0613 468 PRINTS P450 superfamily signature 407 416 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0613 468 PRINTS P450 superfamily signature 416 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0613 468 PANTHER CYTOCHROME P450 26 12 465 - -
Gso16g0613 468 Pfam Cytochrome P450 39 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0613 468 Gene3D Cytochrome P450 29 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0613 Gso-Chr16 7752506 7755856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0613 1 462 Cytochrome P450 AT4G19230 70.474 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0613 K09843 - gmx:100779810 918.302
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1307 1 49571337 49574219 Gso16g0613 16 7752506 7755856 PCT
Gso9g1805 9 42539504 42542417 Gso16g0613 16 7752506 7755856 PCT
Gso16g0613 16 7752506 7755856 Gso1g1307 1 49571337 49574219 PCT
Gso16g0613 16 7752506 7755856 Gso9g1805 9 42539504 42542417 PCT