Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0605 ATGCGTCCACGCAAGGACAGAGAGGGACGCAGATTCGGTTTCGACCCAATAAACTCAGCACCCTCCTTCTCCTCCGAATCACCGCGGCGAAGGCCGAAGCTCTTGGCGGTGCTGATGGCGGGGCAGTCGCGGAAATGGATGATCCTGGTGGCCACGATTTGGATTCAGGCCTTCACGGGAACCAATTTCGATTTCTCGCAGTACTCGTCGTCGCTCAAATCCGCGCTTAACGTGTCGCAGGTGCAACTGAACTATCTCGCGACGGCGAACGATATGGGGAAGGTTTTCGGGTGGTCCTCGGGGATTGCCCTAATGCACCTGCCGGTTTCTGTTGTTATGTTTGTCGCGGCTTTCATGGGCTTCTTCGGCTACGGCCTCCAGTGGCTCCTCATCACCGGCGTCGTCGATTTGCCTTATTTTCTGGTTTTTCTTCTGTGCCTTTTAGGAGGCTGTAGCATCTGTTGGTTCAACACTGTATGTTTTGTTCTCTGCATTAGGAATTTTCCGGTTAACCGAGCACTTGCATTATCACTCACTGTGAGTTTCAATGGCATCAGTGCAGCACTCTACACCCTTGTTGCCAATTCAATTGATCCATCATCCGATGCACTGTATCTTCTATTGAATGCTCTTGTTCCCCTTCTCATATGTATTGCAGTACTTGTTCCTATTCTTCGCCAGCCGGCTTTAGACCCTCTCCCTCCTGATGCAGTAAATCAGGACTCAATGATATTTCTAATATTGAACTTCATAGCCCTTTTAACTGGTCTTTATCTTCTCCTGTTTGGCTCATCTGCTTCTGGTGTGACTTCTGCTCAGCTCTATTTTGGTGGAGCTACTCTCCTCCTCATCTTCCCATTATGTATTCCTGGCATTGTATATGCTCGGGCTTGGTTTCGGCGTACCATCCATTCCAGCTTTCAGATGGGAAGCTCTAGCTTCATTCTTGTTCATGATGATGATCTTGAGATGCATAGAGAGCTCCATAGCTGTCACAATAGTATTGTTAGAAATGGAGATACTTACAGTCTGCTTAGTGATAACGGATACATGTTTGGGAGCCAGAGGGAAAAAGATAGTGATATGTGTTGTGAGACGATGATTGTCCAGGATCACTTAACAGTGCTAGGAGAAGAGCACCCAGTAGCAGTAGTTGTCCGCAGATTGGATTTTTGGCTATACTATGCTACATACTTGTGTGGAGGTACACTTGGTCTAGTCTATAGCAATAATCTGGGACAGATTGCCCAATCTCTGGGTCAGCGTTCAAATACTTCTACACTTGTCACGCTCTATGCAACCTTTTCCTTTTTTGGTCGCTTGCTTTCAGCTGGACCAGACTATATTCGGAATAAGATCTACTTTGCAAGGACTGGTTGGTTATCGATTTCACTTATACCAACCCCAGTTGCATTCTTCCTCCTTGCTGCATCAGACAGTCTTCTGACACTGCAGACAGGCACCGCACTGATTGGATTGAGCTCTGGTTTTATATTCGCAGCTGCTGTGTCAGTTACATCTGAGCTGTTTGGACCAAACAGTGTGGGCATCAATCACAACATTCTCATATCAAATATCCCTATTGGATCTCTTCTCTATGGCTTTCTTGCTGCACTAGTTTACGATGCTAATGCACACTCAATACCCGGAAACTTGATAACGTCTGACTCAGTAGTGTGCATGGGAAGGCAGTGTTACTTCTGGACATTTGTCTGGTGGGGATGCATATCTGTCCTGGGACTAGCTTCCAGCATGCTATTATTCTTAAGAACGAAACATGCATATGATCATTTTGAGAAGAACCGTATTTCAACTCAATAA 1821 0.4624 MRPRKDREGRRFGFDPINSAPSFSSESPRRRPKLLAVLMAGQSRKWMILVATIWIQAFTGTNFDFSQYSSSLKSALNVSQVQLNYLATANDMGKVFGWSSGIALMHLPVSVVMFVAAFMGFFGYGLQWLLITGVVDLPYFLVFLLCLLGGCSICWFNTVCFVLCIRNFPVNRALALSLTVSFNGISAALYTLVANSIDPSSDALYLLLNALVPLLICIAVLVPILRQPALDPLPPDAVNQDSMIFLILNFIALLTGLYLLLFGSSASGVTSAQLYFGGATLLLIFPLCIPGIVYARAWFRRTIHSSFQMGSSSFILVHDDDLEMHRELHSCHNSIVRNGDTYSLLSDNGYMFGSQREKDSDMCCETMIVQDHLTVLGEEHPVAVVVRRLDFWLYYATYLCGGTLGLVYSNNLGQIAQSLGQRSNTSTLVTLYATFSFFGRLLSAGPDYIRNKIYFARTGWLSISLIPTPVAFFLLAASDSLLTLQTGTALIGLSSGFIFAAAVSVTSELFGPNSVGINHNILISNIPIGSLLYGFLAALVYDANAHSIPGNLITSDSVVCMGRQCYFWTFVWWGCISVLGLASSMLLFLRTKHAYDHFEKNRISTQ* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0605 606 SUPERFAMILY MFS general substrate transporter 279 593 IPR036259 -
Gso16g0605 606 Gene3D MFS general substrate transporter like domains 14 223 IPR036259 -
Gso16g0605 606 SUPERFAMILY MFS general substrate transporter 26 228 IPR036259 -
Gso16g0605 606 MobiDBLite consensus disorder prediction 1 27 - -
Gso16g0605 606 Pfam Nodulin-like 45 290 IPR010658 -
Gso16g0605 606 Gene3D MFS general substrate transporter like domains 385 599 IPR036259 -
Gso16g0605 606 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 27 606 - -
Gso16g0605 606 PANTHER NODULIN-LIKE/MFS TRANSPORTER 27 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0605 Gso-Chr16 7589514 7595044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0605 1 604 Nodulin-like Gene Family AT1G31470 55.993 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0605 - - gmx:100775725 1136.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0605 16 7589514 7595044 Gso3g0850 3 30606473 30615284 GST
Gso1g1290 1 49330468 49335694 Gso16g0605 16 7589514 7595044 PCT
Gso9g1787 9 42327557 42332306 Gso16g0605 16 7589514 7595044 PCT
Gso16g0605 16 7589514 7595044 Gso1g1290 1 49330468 49335694 PCT
Gso16g0605 16 7589514 7595044 Gso9g1787 9 42327557 42332306 PCT