Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0597 ATGGAGAGGTACAAGTTAATTAAGGAAGTAGGTGATGGAACATTTGGGAGTGTTTGGAGAGCCATTAATAAGCAAAGTGGTGAAGTTGTTGCAATCAAGAAAATGAAAAAGAAATATTACTCTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAGTCATTACGGAAAATGAATCATGCAAATATTGTGAAGCTGAAGGAAGTTATACGAGAATGTGACACTCTGTGCCTTGTTTTTGAGTACATGGAATACAACCTGTACCAACTTATGAAAAACAGGGAAAAGCTGTTTTCTGAAAATGAAGTTAGAAATTGGTGTTTTCAAGTTTTCCAAGGTTTAGCTTACATGCACCAGCGTGGATACTTTCATCGTGATCTTAAGCCTGAAAACTTGCTGGTCACCAAAGATGTCATCAAGATTGCTGATTTTGGCCTAGCCAGAGAGATCAGTTCACTACCACCCTATACTGAGTATGTCTCCACACGGTGGTATCGTGCTCCTGAAGTCCTGCTTCAGTCCCATCTATATAGCTCTAAAGTTGATATGTGGGCAATGGGTGCTATAATGGCTGAGTTGTTCACTCTCCGTCCTCTATTCCCCGGTTCCAGTGAAGCAGATGAGATTTACAAAATATGCAGTGTGCTAGGTAGTCCAACCACTGAATCTTGGGCAGATGGACTCAAACTTGCCAGGGATATCAACTATCAGTTTCCACAGCTTGCTGGTGTACATCTCTCTACACTGATCCCATCCAGAAGCGATGATGCAATCAGCCTTGTGACGTCACTTTGTTCATGGGATCCCTGCAAGAGACCAACAGCAGCAGAGGTTCTTCAACATCCTTTTTTTCAGAGTTGCTTTTACATCCCTCCATCCCTTCGCACCAGAGCTGTAACCAGAACTCCACCATCTGCTGGGACCAGGGGATCACTGGATCGGCTGGGCCTCAAGAGATACTCTGGTGCTTTGCCTAATACAAAAATCACCAACAATTTTACTTCCCCAAAAGTACAAGCTTCTATAGCTTCAGGTGTGCAAAGGAAGCTGGATATGGCAAATGAGGATGGAATTAAGAGCAAGAAATCATTGAAGACTACTCAACAATCAAAATATCGATTACCAGGAAAAGGCAGCCCAACTTCTATAAACAAGGGGAGGACTGCACGTGGGGTTTCAGAAACAGCTGAGAAGTTGGTCAATATGTCAATCGGTACTCGAAGACTGTCCTTGGGACAAACCCGTCCGCCTCCCATGAAGGCTGGAGTCAATTGGATTTCTGAATCTGGAAACTTGCTCAGGTCCGGACAACAAATTCCAACTGAAAGAACTTTGACAAGAAAAGTTGCCGGGTGA 1353 0.4361 MERYKLIKEVGDGTFGSVWRAINKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHANIVKLKEVIRECDTLCLVFEYMEYNLYQLMKNREKLFSENEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKDVIKIADFGLAREISSLPPYTEYVSTRWYRAPEVLLQSHLYSSKVDMWAMGAIMAELFTLRPLFPGSSEADEIYKICSVLGSPTTESWADGLKLARDINYQFPQLAGVHLSTLIPSRSDDAISLVTSLCSWDPCKRPTAAEVLQHPFFQSCFYIPPSLRTRAVTRTPPSAGTRGSLDRLGLKRYSGALPNTKITNNFTSPKVQASIASGVQRKLDMANEDGIKSKKSLKTTQQSKYRLPGKGSPTSINKGRTARGVSETAEKLVNMSIGTRRLSLGQTRPPPMKAGVNWISESGNLLRSGQQIPTERTLTRKVAG* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0597 450 CDD STKc_MAK_like 4 283 - -
Gso16g0597 450 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 403 - -
Gso16g0597 450 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Gso16g0597 450 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Gso16g0597 450 MobiDBLite consensus disorder prediction 353 392 - -
Gso16g0597 450 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Gso16g0597 450 Gene3D Transferase(Phosphotransferase) domain 1 84 289 - -
Gso16g0597 450 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 1 403 - -
Gso16g0597 450 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0597 450 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0597 450 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0597 450 MobiDBLite consensus disorder prediction 362 388 - -
Gso16g0597 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0597 Gso-Chr16 7409757 7418540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0597 1 290 Core Cell Cycle Gene Families AT3G48750 36.700 1.14e-68 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Gso16g0597 Pkinase 2.1e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0597 K08829 - gmx:100819558 901.353