Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0596 ATGTTTACGTGCATTGCGTGTACGAAGACGGATGATAAGGATGAAGAAGGAGGAGCTCGTGAGAGTGGCACGCCGAGTACAAAAGAAGCCGTCAAAAGCCTGACCACGCAGATAAAGGATATGGCACTGAAGTTTTCAGGTGCATACAAGCAATGCAAACCCTGCACAGGGTCCAGTAGCTATAAGAAAGAACATAGGCCATATCCAGATTTTGATACTATCTCAGAAGGGGTTCCATACCCTTATATTGGAGGTGCAAGCTCAAGTTCAACACCTGCATGGGACTTCACAACCTCTCACTACCCTGGTGGAAGATCTGACCCTAGATTTGCTGGGGCATTTGGCGGTGACCGCACGCCGAGAGCACGTGACTCAACATCAGTTTGTGATGTAGTCTTAGAGGATGAGGATGAGCCTAAGGAGTGGATGGCACAGGTGGAGCCAGGGGTTCACATTACCTTTGTGTCTCTTCCTAATGGAGGAAATGATCTTAAGAGAATTCGCTTCAGCCGAGAGATGTTTAATAAATGGCAAGCTCAAAGATGGTGGGGTGAGAATTACGACAGAATCATGGAACTTTACAACGTCCAGAGATTTAATAAACAAGCTCTTAACACTCCTTCAAGGTCTGAGGATGAGCAAAGAGATTCTTCTTACTCAAGATTGACATCTGCAAGGGAAAGCCCCATGGCCTCAAACAAGGATTGGACGCCGAGGAGTCATTATAAGCCCTCAGGGAGCAGAGGATATTACCCGTCTGAACCGTTGGATCACGGTGGAGGTGGTGGCCAATACCATGCAGGGCCATCTATGGAACCAGCAAGGGATACCACTGCTTCTAGAGATGAGCCTTCTATCAGCAATGCCAGTGAAATGGAGACAGAATGGGTAGAACAAGACGAGCCAGGAGTTTACATTACAATCAGGCAGTTAGCTGATGGAACAAGAGAGCTTAGACGTGTCAGATTCAGCCGGGAAAGATTTGGGGAGGTGAATGCAAAAACTTGGTGGGAAGAGAACAGAGAGAGAATACAAGCTCAATATCTTTGA 1050 0.4705 MFTCIACTKTDDKDEEGGARESGTPSTKEAVKSLTTQIKDMALKFSGAYKQCKPCTGSSSYKKEHRPYPDFDTISEGVPYPYIGGASSSSTPAWDFTTSHYPGGRSDPRFAGAFGGDRTPRARDSTSVCDVVLEDEDEPKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREMFNKWQAQRWWGENYDRIMELYNVQRFNKQALNTPSRSEDEQRDSSYSRLTSARESPMASNKDWTPRSHYKPSGSRGYYPSEPLDHGGGGGQYHAGPSMEPARDTTASRDEPSISNASEMETEWVEQDEPGVYITIRQLADGTRELRRVRFSRERFGEVNAKTWWEENRERIQAQYL* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0596 349 ProSiteProfiles BRX domain profile. 294 349 IPR013591 -
Gso16g0596 349 Pfam Transcription factor BRX N-terminal domain 21 55 IPR027988 -
Gso16g0596 349 ProSiteProfiles BRX domain profile. 140 195 IPR013591 -
Gso16g0596 349 Pfam Transcription factor regulating root and shoot growth via Pin3 140 194 IPR013591 -
Gso16g0596 349 Pfam Transcription factor regulating root and shoot growth via Pin3 293 348 IPR013591 -
Gso16g0596 349 PANTHER BREVIS RADIX-LIKE PROTEIN-RELATED 1 349 - -
Gso16g0596 349 MobiDBLite consensus disorder prediction 221 240 - -
Gso16g0596 349 MobiDBLite consensus disorder prediction 204 296 - -
Gso16g0596 349 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 349 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0596 Gso-Chr16 7400367 7408087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0596 1 349 Major Intrinsic Protein MIP AT1G31880 69.359 8.76e-173 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0596 - - gmx:100819016 708.368