Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso16g0588 | ATGGAGTTTGATCCAATCTTCCCAGCAGAAAAAATTCACTTCCTTTCTGGTATTTTCTCTGGGATCAAATCAGAGATCCCTGTTATCCCCATGTCACAAGAGAACAACAACAACACCATCTGCATGCACCAAAACAATTTCAACAACCATTTTCAGCACCTTCCCCTGAATGAACCAAACCATGACCATAACCACCACCATCCTACTATTACAAAAATTTTCACAGAGGGTTCTAATTCCTCCATCCTCACCCCATTGTTCTGTTTGTCCTCTTCTTCAGGTTACTCATACCGTAATGAGTCCCTCAGAGGAGGCTTTGCCAACAACAACAACAACTACAAACACTCCATCATGCCTTATGCACCAAACAGCACCCAAAATGAACCCATGCATGGCCCCAACAGAGCAATCTGGGATTTTTCCCAGAAAATTCCCCTTCAGTACTCTGGTGCAGGTGCAAGTGCAACTTCATCACAGCCTCATCAGGTGCAAAGGAGGAGTAATGGCAAAATTCATCAGCACAGGAATATGGGCAACATAATCAAAGGCCAGTGGAGTGCTGAAGAGGACAGGGTGCTCGTCCAATTGGTGGAACGCTTCGGGTTCAAAAAATGGTCTCACATCGCAAGGTTGCTGAATGGAAGGGTTGGGAAACAGTGCAGGGAAAGATGGCACAACCATCTCAGGCCAAACATTAGGAAGGAGTCATGGAACGAAGAGGAGGACAGAATCCTGATCGAAGCTCACAAGGAGGTTGGAAACAGGTGGGCCGAAATCGCAAGGAGAATGCCTGGTAGGACGGAGAACACCATCAAGAACCACTGGAACGCAACAAAGCGTCGCTTGAACGCCAAGAGGCTGAGGAACAAGCGCAGGGGTTTGAAGGGACCAACGCTTTTGGAGAGCTACATAAGGCAAGTCACTGCAAATGAAGAAACCCAAAAGGAGATGATCAAGAATTCCATGAGCAACATGAACCTGAAGGGCGAGAGTAGTAGCAACACCACCACCACTAATACCAATACCAATACCAATACCAGATATCCGCATCTCTTTCGGGTTTGGTATGAGAGCTCAGAGGGTGGGTTCAGTTCTGAGGAGGATGAGGCTGGGTGGAGTGTGCAGCAGCCACATGGTGTTGGTGGCGGCTATGTGCCTATGATGCTAAATGCTACTGTGGAAGATGGCACAATGGGTTATGATGTTGCGATGGAGATGGCGCCGGAGGTTCAGATGAAGAAGGAAATGGATCTCATGGAGATGATCATTAGAAAAGCTTAA | 1281 | 0.4723 | MEFDPIFPAEKIHFLSGIFSGIKSEIPVIPMSQENNNNTICMHQNNFNNHFQHLPLNEPNHDHNHHHPTITKIFTEGSNSSILTPLFCLSSSSGYSYRNESLRGGFANNNNNYKHSIMPYAPNSTQNEPMHGPNRAIWDFSQKIPLQYSGAGASATSSQPHQVQRRSNGKIHQHRNMGNIIKGQWSAEEDRVLVQLVERFGFKKWSHIARLLNGRVGKQCRERWHNHLRPNIRKESWNEEEDRILIEAHKEVGNRWAEIARRMPGRTENTIKNHWNATKRRLNAKRLRNKRRGLKGPTLLESYIRQVTANEETQKEMIKNSMSNMNLKGESSSNTTTTNTNTNTNTRYPHLFRVWYESSEGGFSSEEDEAGWSVQQPHGVGGGYVPMMLNATVEDGTMGYDVAMEMAPEVQMKKEMDLMEMIIRKA* | 427 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso16g0588 | 426 | PANTHER | MYB DOMAIN PROTEIN 100-RELATED | 42 | 345 | - | - | |
Gso16g0588 | 426 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 177 | 232 | IPR017930 | - | |
Gso16g0588 | 426 | MobiDBLite | consensus disorder prediction | 150 | 170 | - | - | |
Gso16g0588 | 426 | MobiDBLite | consensus disorder prediction | 325 | 345 | - | - | |
Gso16g0588 | 426 | PANTHER | MYB PROTEIN-RELATED | 42 | 345 | - | - | |
Gso16g0588 | 426 | ProSiteProfiles | Myb-like domain profile. | 229 | 279 | IPR001005 | - | |
Gso16g0588 | 426 | Pfam | Myb-like DNA-binding domain | 185 | 242 | - | - | |
Gso16g0588 | 426 | ProSiteProfiles | Myb-like domain profile. | 177 | 228 | IPR001005 | - | |
Gso16g0588 | 426 | Gene3D | - | 181 | 233 | - | - | |
Gso16g0588 | 426 | CDD | SANT | 236 | 279 | IPR001005 | - | |
Gso16g0588 | 426 | SMART | sant | 181 | 230 | IPR001005 | - | |
Gso16g0588 | 426 | SMART | sant | 233 | 281 | IPR001005 | - | |
Gso16g0588 | 426 | MobiDBLite | consensus disorder prediction | 150 | 166 | - | - | |
Gso16g0588 | 426 | SUPERFAMILY | Homeodomain-like | 179 | 275 | IPR009057 | - | |
Gso16g0588 | 426 | Gene3D | - | 235 | 296 | - | - | |
Gso16g0588 | 426 | CDD | SANT | 185 | 228 | IPR001005 | - | |
Gso16g0588 | 426 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 233 | 283 | IPR017930 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso16g0588 | Gso-Chr16 | 7269515 | 7272948 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso16g0588 | 178 | 307 | MYB Transcription Factor Family | AT4G18770 | 66.923 | 5.56e-61 | 202 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB | Gso16g0588 | Myb_DNA-bind_6 | 3.4e-18 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso16g0588 | K09422 | - | gmx:100805329 | 809.29 |