Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0574 ATGGGGTCTCCTGTTAATGAAGTTGATTCTTTATCAGAGGTTCAGAATTTAGTTTCTGTGGTAGATCATGATCCTCCTTCGACATCTGGGATTCTCCGGTCTTCTCGGCCTCCATTAAGAGCACCAAGGAATTATGGGGCTTCCTCCAGTCAAAAGCATTCCTATCAGGAGGCTGACAATGTGGAACACGACAGAATGCCTAATATGGAGAATCAGTATTACGACGCTAACAGCAAGTCTGACAATGCAAGCCTCAATAAAGCTGTTGAAAGTTGTTTAGGAAAGAATATCTCCTCTATGGAAACAAAACTAAGCATCAAGCAACCATTAGATGCTTCCAAGAATTGTGACTCTGGTGGCGTGTTAGAATCTGACAATTGCAAATTAGGTTCATCAAAAGGAGTTGTTGATCCAACAAAGAGTTACTGTCAATCGGAGATTACTTTTTGTCCAAGTCCTCAGAATAGTTTCTATTCAGAAGCCAAGGAAAGTTTTGTCAATACTGGAGCCAGTGAATGTGTGAGTGTTGATAAGTCAGTTGAAAGTGGAGAAGTTACTAATTCCTGTGAATTTAATGAGAGCAGAAAGACCAGCATCTGTAGAGGGAGTACTGGAAGTGACGTTAGCGACGAGAGCAGCACTAGTAGTTTGAGCAGTACTTTGTATAAACCCCACAAGGCAAACGATATAAGATGGGAAGCGATTCAAGCCATCCGAGTCCGTGATGGGGTGTTGGAAATGAGACATTTCAGGTTGTTGAAGAAATTGGGATGTGGAGACATAGGAAGTGTATATCTAGCTGAGTTAAGTGGCACAAGGACTTGTTTTGCCATGAAAGTAATGAACAAAACCGAGCTGGCAAGTCGTAAGAAGCTTGTTAGGTCTCAGACAGAGAGAGAGATACTGCAGTCTTTAGATCATCCATTTCTACCCACTTTATATACACACTTTGAGACTGAGACATTCTCCTGCTTGGTGATGGAGTTTTGCCCTGGTGGGGACTTGCATGCACTAAGGCAAAGACAACCTGGGAAGTACTTTTCTGAGATTGCTGCCAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAATACTTGCACATGCTTGGGGTGATCTACAGAGACCTTAAGCCGGAAAATGTGTTGGTGAGAGAAGATGGTCATATAATGCTATCAGATTTTGATCTCTCTCTAAGGTGTGCTGTCAGTCCAACTCTTGTGAAGTCATCAAACTCTAGCTTGGAGACAAAAAGCTCAGGATACTGCATTCAGCCTGCTTGCATTGAACCAACTTGTGTAATACAGCCAGCCTGCATTCAACCTTCGTGTTTCACACCGCGCTTTTTCTCCAGCAAATCCAAGAAAGAAAAAAAGTCAAAACCAAAGAATGATTTGCAGAATCAGGTGACCCCTCTCCCCGAGCTTATTGCTGAGCCCACGAATGCTCGTTCAATGTCCTTCGTGGGGACACACGAGTACCTGGCACCCGAAATCATCAAAGGCGAAGGGCATGGCAGTGCTGTAGACTGGTGGACATTTGGGATATTCCTATACGAGCTCTTGTTCGGCAGAACACCGTTCAAAGGTTCGGCTAACCGAGCAACGCTATTCAATGTTGTTGGCCAGCCCTTGAAATTTCCTGAATCCCCTACAGTCAGCTTTGCTGCCAGGGACTTGATCCGGGGCTTACTCGTGAAAGAGCCTCAGAATCGCCTCGCATATAGACGTGGGGCAACGGAAATAAAGCAACATCCATTCTTTCATAATGTTAACTGGGCACTGATCCGATGTGCAAATCCTCCAGAAGTTCCAAGACTGGCCATGAAGGCACTTGCAGCTGAAAAGGTGCCTGGTGTGAAGCCTTCTGGTAACTATTTAGATATTGATTTCTTTTGA 1896 0.443 MGSPVNEVDSLSEVQNLVSVVDHDPPSTSGILRSSRPPLRAPRNYGASSSQKHSYQEADNVEHDRMPNMENQYYDANSKSDNASLNKAVESCLGKNISSMETKLSIKQPLDASKNCDSGGVLESDNCKLGSSKGVVDPTKSYCQSEITFCPSPQNSFYSEAKESFVNTGASECVSVDKSVESGEVTNSCEFNESRKTSICRGSTGSDVSDESSTSSLSSTLYKPHKANDIRWEAIQAIRVRDGVLEMRHFRLLKKLGCGDIGSVYLAELSGTRTCFAMKVMNKTELASRKKLVRSQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPGKYFSEIAARFYVAEVLLALEYLHMLGVIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSNSSLETKSSGYCIQPACIEPTCVIQPACIQPSCFTPRFFSSKSKKEKKSKPKNDLQNQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLKFPESPTVSFAARDLIRGLLVKEPQNRLAYRRGATEIKQHPFFHNVNWALIRCANPPEVPRLAMKALAAEKVPGVKPSGNYLDIDFF* 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0574 631 ProSiteProfiles Protein kinase domain profile. 250 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0574 631 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 5 631 - -
Gso16g0574 631 SMART serkin_6 250 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0574 631 Gene3D Transferase(Phosphotransferase) domain 1 481 605 - -
Gso16g0574 631 SUPERFAMILY Protein kinase-like (PK-like) 224 606 IPR011009 -
Gso16g0574 631 CDD STKc_phototropin_like 248 607 - -
Gso16g0574 631 PANTHER FLIPPASE KINASE 1-RELATED 5 631 - -
Gso16g0574 631 Pfam Protein kinase domain 251 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0574 631 Pfam Protein kinase domain 484 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0574 631 MobiDBLite consensus disorder prediction 16 64 - -
Gso16g0574 631 Gene3D Transferase(Phosphotransferase) domain 1 334 401 - -
Gso16g0574 631 MobiDBLite consensus disorder prediction 16 34 - -
Gso16g0574 631 Gene3D Phosphorylase Kinase; domain 1 248 333 - -
Gso16g0574 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 371 383 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0574 Gso-Chr16 6971579 6975776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0574 175 631 AGC Kinase Gene Family AT5G47750 74.051 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gso16g0574 Pkinase 7.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0574 K08286 - gmx:100812077 1222.99