Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0554 ATGGTTGAGCTTTTGGCAGTCATATGTACTCTCTTCTCAGCCCTTGCCTTTGTTTATCTTCTCAAATATCGTAACAAAAACAAACAAGATTCCCCACACAAATTGCCACCTGGAAGCATGGGGTGGCCCTTTTCTGGGGAAACTCTTGGCTTCCTCAAGCCTCATAGATCAAACTCCTTGGGAAGCTTCTTACAAGAACGCTGTTCTAGGTATGGCAAAGTTTTCAAGTCGCATTTGTTTGGTTCTCCCACCATAGTTTCATGTGACTTTGAGTTCAACATGTATATTCTTCAGAATGAAGGGACATTATTCCCTGTTGATTACCCCAAGGTTATGCATAACATACTGGGGAAGTTTTCTCTTCTTCTTGTCAAAGGAGACCTTCACAGAAAGCTAAGAAGCACCATTATTAGTTTTGTCAGTGCAACAAAGCACGAATCCAATTTCCTTCACTGTGTGGAAATGCTTGCACTCTCAAGGATTAACTCATGGATTCCAATCTCTAAACAAGTTGCTTTCTACGAAGAAGCTAAAAGGTTTACGATTAATGTTATGATGAAGCACCTATTGAACATTAATCCAGATGATCCACTAGCCTTCAAGATTTTAGGGAACTTTGAGAACTACATCAAAGGCTTTATTTCATTGCCAATACGTATACCCGGGACGGCATATTTCAAAGCTTTGCAGGCTAGAATAAGACTCTCAGCCATTATCAAAGATATCATAATAGAGAGGCGTAAATGTAATAATGTGAGGCCTATGCAAGGAGGGGACCTCTTGAATGTGATTTTGTCAAAGAAAAACCTAAGTGATGAAGAGATGGTGAGCATTGTGTTGGACCTATTGTTTGGAGGTTATGAGACAACTGCAAAACTTCTGTCTTTGATTGTCTATTTCCTTGGTGGAGCCTCTAATGCTTTAGAAAGTTTAAAGGAAGAACACCAAGAGATAAGAAAAAGAAAAAAGGAGGGAGAACTACTTAACTGGGAAGATTATAAGCAAATGAACTTCACTCAAAATGTGATATACGAAGCTATGAGATGTGGCAATGTAGTCAAATTTTTGCACAGGAAAGCTATTCAAGATGTCAAATTCAAAGATTATGTGATACCCGCAGGATGGAAGGTTCTTCCTGTCTTGTCTTCTGGACATTTGGATCCCACCCTTTTTGAAAATCCTTTGGAGTTCAACCCCTTTCGGTGGAATGACAATTCGACAAGCAAGAAAGTGGCACCATTTGGTGGGGGTCCACGATTCTGTCCAGGGGCTGATCTAGCAAAAGTTGAGACAGCATTCTTCCTTCATCATCTTGTCCTTAATTATAGGTGGAAAATTAGGACAGATGATCCCCCACTTGCTTTTCCGTATGTGGAATTCACTAGAGGGCTGCTATTGAATCTTGAACCCACTGCCTAG 1419 0.4038 MVELLAVICTLFSALAFVYLLKYRNKNKQDSPHKLPPGSMGWPFSGETLGFLKPHRSNSLGSFLQERCSRYGKVFKSHLFGSPTIVSCDFEFNMYILQNEGTLFPVDYPKVMHNILGKFSLLLVKGDLHRKLRSTIISFVSATKHESNFLHCVEMLALSRINSWIPISKQVAFYEEAKRFTINVMMKHLLNINPDDPLAFKILGNFENYIKGFISLPIRIPGTAYFKALQARIRLSAIIKDIIIERRKCNNVRPMQGGDLLNVILSKKNLSDEEMVSIVLDLLFGGYETTAKLLSLIVYFLGGASNALESLKEEHQEIRKRKKEGELLNWEDYKQMNFTQNVIYEAMRCGNVVKFLHRKAIQDVKFKDYVIPAGWKVLPVLSSGHLDPTLFENPLEFNPFRWNDNSTSKKVAPFGGGPRFCPGADLAKVETAFFLHHLVLNYRWKIRTDDPPLAFPYVEFTRGLLLNLEPTA* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0554 472 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 414 423 IPR017972 GO:0005506|GO:0016705
Gso16g0554 472 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0554 472 PRINTS E-class P450 group I signature 274 291 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0554 472 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0554 472 PRINTS E-class P450 group I signature 411 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0554 472 PRINTS E-class P450 group I signature 421 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0554 472 Pfam Cytochrome P450 36 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0554 472 Coils Coil 301 328 - -
Gso16g0554 472 Gene3D Cytochrome P450 24 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0554 472 PANTHER CYTOCHROME P450, FAMILY 724, SUBFAMILY A, POLYPEPTIDE 1 38 469 - -
Gso16g0554 472 SUPERFAMILY Cytochrome P450 31 453 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0554 472 PRINTS P450 superfamily signature 285 302 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0554 472 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0554 472 PRINTS P450 superfamily signature 412 421 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0554 472 PRINTS P450 superfamily signature 421 432 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0554 472 PANTHER CYTOCHROME P450 26 38 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0554 Gso-Chr16 6720031 6724380 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0554 40 366 Cytochrome P450 AT5G14400 56.193 2.13e-131 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0554 K12639 - gmx:100791737 959.518