Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0546 ATGTGCAACAAGAACAGTCCTTCTTCTTCGGACATTCAAGCAACCTCTATTATGAAGAGGACGCGGAAGCCGAATAGAAGGTATCATCATAATACCACTTCTTCCTCTTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCCACGACGTCGTTTAAGCCGCACCGGCGCGGGAACAGAACCAAGACGCGGAAGCCCAAGTTTGTCAGCCTGCGGCTTCAGTTATCCGATCCTAAGAAAAAGATGAAAACAACCCAGCCCAAGCCCAAGCCCAAGCCCAAGCCCAAGCCCAAGCCCAAGCCCAAGCCTAAGGCCCAACAACAAGAACAGCAGCAGCAACAGCCGCAGCTGAATCTCTTCCCTCTCCATCCGGACCACCATGACATGCACGAGGAGCAGAACGTGGCGCTTCTCTTTAGCTCCGATGGTGGGGCCACACTCAACGGCCTACTGGAGGAGGAGACGACTACGACGGAGGAAGGGTCGATGTCGGTGCTGACGTGTCCGGCGGAGGACACCGGGAACTGGCTGGTACGGAAGGCGATGCGGCGGAGGGAGAGCGAGGAGGGGAGTGAAGAGCGGTGGGTGTGCTACTCGGAGGTGGTGGAGGAGAAGAAGGAGGCCATGGAGGAGGTCACGAGTTATTGCGTCACGGGGGAAACGAAGACGAAGACGAAGACGAAAACGCCGTCGTTTGGATTGTTGTCGTTGAAGCTGGATCACCAGGGGATATTGAATGCATGGTCTGATAAAGGCTCTCTCTACGTCGCGGCGGAGGAGGAGGAGGAGGGGGGCCCACAGACTGTCCCTGACATATTCAATGGTTTCCTTTTTCATAATGTTGCATGGGACGGGTTGGGGAGTGGTGGTGTTGTTGGGAATGCATGGAATGTTCCTGAAAATTGTGGGGCTAACAAGACTAATGTGAAGGAAGAAATGGGTTGGAAGTTGGGGCAGAGAGAGGCAAGTTTGCAGAGATACAAGGAGAAGAGGCAAAGCAGGCTCTTCTATAAGAAAATCCGTTATGAAGTTCGCAAGCTGAATGCTGAGAAACGGCCCAGGATGAAGGGACGATTTGTGAAGAGGGAATGA 1095 0.5324 MCNKNSPSSSDIQATSIMKRTRKPNRRYHHNTTSSSSSSSSSSSSSSSSTTSFKPHRRGNRTKTRKPKFVSLRLQLSDPKKKMKTTQPKPKPKPKPKPKPKPKPKAQQQEQQQQQPQLNLFPLHPDHHDMHEEQNVALLFSSDGGATLNGLLEEETTTTEEGSMSVLTCPAEDTGNWLVRKAMRRRESEEGSEERWVCYSEVVEEKKEAMEEVTSYCVTGETKTKTKTKTPSFGLLSLKLDHQGILNAWSDKGSLYVAAEEEEEGGPQTVPDIFNGFLFHNVAWDGLGSGGVVGNAWNVPENCGANKTNVKEEMGWKLGQREASLQRYKEKRQSRLFYKKIRYEVRKLNAEKRPRMKGRFVKRE* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0546 364 MobiDBLite consensus disorder prediction 86 102 - -
Gso16g0546 364 MobiDBLite consensus disorder prediction 1 19 - -
Gso16g0546 364 MobiDBLite consensus disorder prediction 1 115 - -
Gso16g0546 364 PANTHER CCT MOTIF FAMILY PROTEIN 48 364 - -
Gso16g0546 364 ProSiteProfiles CCT domain profile. 321 363 IPR010402 GO:0005515
Gso16g0546 364 Pfam CCT motif 321 363 IPR010402 GO:0005515
Gso16g0546 364 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 48 364 - -
Gso16g0546 364 MobiDBLite consensus disorder prediction 30 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0546 Gso-Chr16 6602179 6607931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0546 236 363 C2C2-CO-like Transcription Factor Family AT1G73870 40.769 1.06e-18 84.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso16g0546 CCT 8.5e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0546 - - gsj:114391269 575.859