Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso16g0537 | ATGGTGTTCATATTTCCAACGCTTCTGTCCATGAAGCTCCAACCACTTTTGCTGCTTCTTGTGATGTACTTCTGTGCATTTGCTGCTTCTTCTGAGATTGCTTCAGAAGCAAATGCTTTGTTGAAGTGGAAATCCAGCCTTGACAACCAAAGTCATGCTTCTCTTTCTTCATGGAGTGGCAATAATCCTTGCAATTGGCTCGGAATTGCATGTGATGAGTTCAATTCTGTTTCCAACATAAATCTTACAAATGTTGGATTAAGAGGTACGCTTCAAAGTCTCAACTTCTCATTACTTCCAAACATTCTCACTCTAAATATGAGTCACAACTCCTTGAATGGAACTATTCCTCCTCAAATTGGTTCCTTATCCAATCTCAACACTCTTGACTTGTCCACTAATAAACTCTCTGGGTCCATTCCTTTCACCATTGGAAATTTGTCAAGGCTTAGTGTATTATTTATATCCTCTAATGAACTCATTGGACCAATCCCTGCTTCCATAGGCAATTTGGTCAATTTGGACTCCATGCTCCTTCGAGAAAATAAACTCTATGGGTCCATTCCTTTCACCATTGGAAATTTGTCAAAGCTTGCTGTATTATCTATATCCTTAAATGAACTCACTGGACCAATCCCAGCTTCCATAGGCAACTTGGTCAATTTGGACTCCATGCTCCTTCGGAAAAATAAACTCTTTGGGTCCATTCCTTTCACCATTGGAAATTTGTCAAAGCTTAGTGTATTATCTATATACTCTAATGAACTCACTGGACCAATCCCATTAACAACTTACATAGGGAACTTGGTCAATTTGGACTACATTGGCCTTTATGAAAATAAACTCTCTGGGTCCATACCTTTCAGCATTGGAAATTTGTCAAAGCTTAGTGTATTAGCTATATCCTCTAATGAACTCACTGGACCAATCCCAGCTTCCATAGGCAACTTGGTCCAGTTGGACTCCTTGTTCCTTTATGAAAATAAACTCTCTGGGTCAATCCCAGCTTCCATATGCAACTTGGTCAATTTGGACTACATTTGCCTTCATGAAAATAAACTCTCTGGGTCCATTCCTTTCACCATTGAAAATTTGTCAAAGCTTAGTGAATTATCTATATCCTTAAATGAACTCACTGGATCAATTCCTTCAACTATTGGAAATTTATCAAATGTCAGGAAATTATTATTTTTTGGAAATGAACTTGGTGGCAAGATTCCAATAGAAATGAGCATGCTTACTGCTCTCAAAAATTTGCAGCTAGCTGACAATAATTTTGTAGGCCATTTACCTCAAAACATTTGCATTGGTGGAACGTTGAAAAATTTTACCGCTGGTAATAACAACTTCATAGGCCCAATTCCAGTGAGTTTGAAGAATTGCTCCAGCCTTATAAGAGTCAGGCTTCAGAGAAACCAGCTAACTGGGGATATAACAGATGCTTTTGGTGTACTTCCAAATTTGGACCACATCGAATTGAGTGACAATAACTTTTATGGTCAACTTTCACCTAACTGGGGAAAGTTTCGTAGCCTCACAAGCCTCATGATCTCCAACAATAATTTATCAGGTGTGATACCACCAGAACTAGCTGGGGCAACCAAATTACAACGACTTCACCTGTCCTCAAACCATCTTACAGGAAACATTCCACATGATTTATGTAACTTGCCCTTGTTTGATCTCTCACTCGACAACAATAATCTTACAGGAAATGTTCCCAAAGAAATAGCATCAATGCAGAAACTTCAAATTTTGAAGCTTGGATCAAATAAGTTGTCTGGCTTAATCCCAAAACAACTAGGAAATTTACTCAATTTATTGAACATGAGTCTGAGCCAAAATAATTTTCAGGGAAATATTCCTTCAGAGCTTGGCAAACTGAAATTTCTTAGGAGTCTTGATCTTGGTGGAAATTCATTGAGAGGAACAATACCTTCAATGTTTGGAGAATTAAAAAGCTTAGAAACACTGAATCTCTCTCACAATAATCTTTCAGGTGATCTCTCTACCTTCGATGATATGACGAGCTTGACATCTATTGATATATCATACAACCAGTTTGAGGGTCCACTTCCAAACATTCTAGCCTTCCACAATGCTAAAATTGAAGCATTGAGAAATGATAAAGGCTTGTGTGGCAATGTCTCTGGCTTGGAGCCTTGCTCAACATCAAGTGGGAAATCTCATAATCATATGAGGAAGAAAGTAATGATAGTAATTTTACCCCTTACTTTGGGCATTCTAATACTGGCATTATTTGCTTTCGGAGTCTCGTATCATTTATGCCAAACCTCAACGAACAAAGAAGACCAGGCTACAAGTATACAAACTCCTAACATATTTGCAATATGGAGTTTTGATGGCAAAATGGTATTCGAGAATATTATTGAAGCCACAGAAGATTTTGACGACAAACATCTCATTGGTGTTGGAGGGCAAGGATGTGTTTACAAAGCAGTGCTGCCTACAGGTCAAGTTGTTGCTGTGAAGAAACTCCATTCAGTTCCAAATGGAGAGATGCTCAATCTGAAAGCTTTCAGATGTGAGATCCAAGCTTTGACAGAAATTCGACATCGTAACATTGTAAAGTTATATGGGTTTTGTTCACATTCACAATTCTCATTTTTGGTGTGTGAATTCCTGGAGAATGGCTGTGTTGAGAAGACTCTGAAGGATGATGGACAAGCAAGGGCATTTGATTGGTATAAGAGGGTGAATGTCGTTAAAGATGTAGCAAATGCTTTGTTCTATATGCACCATGAATGCTCACCTCGAATTGTTCATCGTGATATATCAAGCAAGAATGTTCTTTTGGATTCCGAATATGTAGCTCATGTCTCAGACTTTGGAACAGCCAAGTTTCTTAATCCAGATTCATCCAATTGGACCTCATTCGTAGGAACCTTTGGATATGCTGCTCCAGAACTTGCATACACAATGGAGGTGAATGAGAAATGTGATGTGTATAGTTTTGGGGTCCTAGCATTGGAAATACTTATTGGGAAGCACCCTGGTGATGTTATATCTTCTTTATTGGGATCATCTCCATCTACCCTTGTGGCCTCAACACTCGATCACATGGCATTGATGGATAAGTTGGATCCACGTCTCCCTCATCCAACAAAGCCAATTGGTAAGGAAGTGGCATCAATTGCAAAGATAGCAATGGCCTGCTTGACTGAAAGTCCACTATCTCGCCCTACCATGGAGCAGGTTGCCAATGAGCTGGTAATGGGAAGCTCATCTTCAATGGATTAG | 3261 | 0.391 | MVFIFPTLLSMKLQPLLLLLVMYFCAFAASSEIASEANALLKWKSSLDNQSHASLSSWSGNNPCNWLGIACDEFNSVSNINLTNVGLRGTLQSLNFSLLPNILTLNMSHNSLNGTIPPQIGSLSNLNTLDLSTNKLSGSIPFTIGNLSRLSVLFISSNELIGPIPASIGNLVNLDSMLLRENKLYGSIPFTIGNLSKLAVLSISLNELTGPIPASIGNLVNLDSMLLRKNKLFGSIPFTIGNLSKLSVLSIYSNELTGPIPLTTYIGNLVNLDYIGLYENKLSGSIPFSIGNLSKLSVLAISSNELTGPIPASIGNLVQLDSLFLYENKLSGSIPASICNLVNLDYICLHENKLSGSIPFTIENLSKLSELSISLNELTGSIPSTIGNLSNVRKLLFFGNELGGKIPIEMSMLTALKNLQLADNNFVGHLPQNICIGGTLKNFTAGNNNFIGPIPVSLKNCSSLIRVRLQRNQLTGDITDAFGVLPNLDHIELSDNNFYGQLSPNWGKFRSLTSLMISNNNLSGVIPPELAGATKLQRLHLSSNHLTGNIPHDLCNLPLFDLSLDNNNLTGNVPKEIASMQKLQILKLGSNKLSGLIPKQLGNLLNLLNMSLSQNNFQGNIPSELGKLKFLRSLDLGGNSLRGTIPSMFGELKSLETLNLSHNNLSGDLSTFDDMTSLTSIDISYNQFEGPLPNILAFHNAKIEALRNDKGLCGNVSGLEPCSTSSGKSHNHMRKKVMIVILPLTLGILILALFAFGVSYHLCQTSTNKEDQATSIQTPNIFAIWSFDGKMVFENIIEATEDFDDKHLIGVGGQGCVYKAVLPTGQVVAVKKLHSVPNGEMLNLKAFRCEIQALTEIRHRNIVKLYGFCSHSQFSFLVCEFLENGCVEKTLKDDGQARAFDWYKRVNVVKDVANALFYMHHECSPRIVHRDISSKNVLLDSEYVAHVSDFGTAKFLNPDSSNWTSFVGTFGYAAPELAYTMEVNEKCDVYSFGVLALEILIGKHPGDVISSLLGSSPSTLVASTLDHMALMDKLDPRLPHPTKPIGKEVASIAKIAMACLTESPLSRPTMEQVANELVMGSSSSMD* | 1087 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso16g0537 | 1086 | Gene3D | Ribonuclease Inhibitor | 437 | 731 | IPR032675 | - | |
Gso16g0537 | 1086 | Gene3D | Ribonuclease Inhibitor | 264 | 436 | IPR032675 | - | |
Gso16g0537 | 1086 | Pfam | Protein kinase domain | 804 | 1076 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso16g0537 | 1086 | PRINTS | Leucine-rich repeat signature | 126 | 139 | - | - | |
Gso16g0537 | 1086 | PRINTS | Leucine-rich repeat signature | 652 | 665 | - | - | |
Gso16g0537 | 1086 | SUPERFAMILY | L domain-like | 34 | 310 | - | - | |
Gso16g0537 | 1086 | Gene3D | Phosphorylase Kinase; domain 1 | 762 | 881 | - | - | |
Gso16g0537 | 1086 | SUPERFAMILY | Protein kinase-like (PK-like) | 783 | 1077 | IPR011009 | - | |
Gso16g0537 | 1086 | ProSiteProfiles | Leucine-rich repeat profile. | 654 | 676 | IPR001611 | GO:0005515 | |
Gso16g0537 | 1086 | Gene3D | Ribonuclease Inhibitor | 196 | 263 | IPR032675 | - | |
Gso16g0537 | 1086 | Gene3D | Transferase(Phosphotransferase) domain 1 | 882 | 1084 | - | - | |
Gso16g0537 | 1086 | Pfam | Leucine rich repeat | 631 | 688 | IPR001611 | GO:0005515 | |
Gso16g0537 | 1086 | SUPERFAMILY | L domain-like | 468 | 714 | - | - | |
Gso16g0537 | 1086 | SMART | LRR_typ_2 | 317 | 341 | IPR003591 | - | |
Gso16g0537 | 1086 | SMART | LRR_typ_2 | 534 | 557 | IPR003591 | - | |
Gso16g0537 | 1086 | SMART | LRR_typ_2 | 628 | 651 | IPR003591 | - | |
Gso16g0537 | 1086 | SMART | LRR_typ_2 | 509 | 533 | IPR003591 | - | |
Gso16g0537 | 1086 | SMART | LRR_typ_2 | 413 | 437 | IPR003591 | - | |
Gso16g0537 | 1086 | SMART | LRR_typ_2 | 365 | 389 | IPR003591 | - | |
Gso16g0537 | 1086 | SMART | LRR_typ_2 | 580 | 603 | IPR003591 | - | |
Gso16g0537 | 1086 | SMART | LRR_typ_2 | 652 | 674 | IPR003591 | - | |
Gso16g0537 | 1086 | SMART | LRR_typ_2 | 99 | 122 | IPR003591 | - | |
Gso16g0537 | 1086 | SMART | LRR_typ_2 | 123 | 147 | IPR003591 | - | |
Gso16g0537 | 1086 | SMART | LRR_typ_2 | 675 | 698 | IPR003591 | - | |
Gso16g0537 | 1086 | Pfam | Leucine rich repeat N-terminal domain | 34 | 72 | IPR013210 | - | |
Gso16g0537 | 1086 | ProSiteProfiles | Protein kinase domain profile. | 803 | 1079 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso16g0537 | 1086 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 131 | 222 | - | - | |
Gso16g0537 | 1086 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 310 | 1083 | - | - | |
Gso16g0537 | 1086 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 10 | 152 | - | - | |
Gso16g0537 | 1086 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 207 | 332 | - | - | |
Gso16g0537 | 1086 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 207 | 332 | - | - | |
Gso16g0537 | 1086 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 10 | 152 | - | - | |
Gso16g0537 | 1086 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 131 | 222 | - | - | |
Gso16g0537 | 1086 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 310 | 1083 | - | - | |
Gso16g0537 | 1086 | SUPERFAMILY | L domain-like | 236 | 558 | - | - | |
Gso16g0537 | 1086 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 927 | 939 | IPR008266 | GO:0004672|GO:0006468 | |
Gso16g0537 | 1086 | Gene3D | Ribonuclease Inhibitor | 33 | 191 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso16g0537 | Gso-Chr16 | 6489566 | 6494529 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso16g0537 | 13 | 975 | Receptor kinase-like Gene Family | AT4G08850 | 42.418 | 0.0 | 720 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Gso16g0537 | Pkinase | 2.3e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso16g0537 | - | - | gmx:100793419 | 1657.88 |