Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso16g0532 | ATGGTGTTCATATTTCCAACGCTTCTGTCCATGAAGCTCCAACCACTTTTGCTGCTTCTTGTGATGTACTTCTGTGCATTTGCTGCTTCTTCTGACATTGCTTCAGAAGCAAATGCTTTGTTGAAGTGGAAATCCAGCCTTGACAACCAAAGTCATGCTTCTCTCTCTTCATGGAGGGGCAATAATCCTTGCAATTGGCTCGGAATTGCATGTGATGAGTTCAATTCTGTTTCCAACATAAATCTTACAAATGTTGGATTAAGAGGTGATCTCTCTAGCTTCGATGATATGACGAGCTTGACATCTATTGATATATCATACAACCAGTTTGAGGGTCCACTTCCAAACATTCTAGCCTTCCACAATGCTAAAATTGAAGCATTGAGAAATGATAAAGGCTTGTGTGGCAATGTCTCTGGCTTGGAGCCTTGCTCAACATCAAGTGGGAAATCTCATAATCATATGAGGAAGAAAGTAATGATAGTAATTTTACCCCTTACTTTGGGCATTCTAATACTGGGATTATTTGCTTTCGGAGTCTCGTATCATTTATGCCAAACCTCAACGAACAAAGAAGACCAGGCTACAAGTATACAAACTCCTAACATATTTGCAATATGGAGTTTTGATGGCAAAATGGTATTCGAGAATATTATTGAAGCCACAGAAGATTTTGACGACAAACATCTCATTGGTGTTGGAGGGCAAGGATGTGTTTACAAAGCAGTGCTGCCTACAGGTCAAGTTGTTGCTGTGAAGAAACTCCATTCAGTTCCAAATGGAGAGATGCTCAATCTGAAAGCTTTCACATGTGAGATCCAAGCTTTGACAGAAATTCGACATCGTAACATTGTAAAGTTATATGGGTTTTGTTCACATTCACAATTCTCATTTTTGGTGTGTGAATTCCTGGAGAATGGCTGTGTTGAGAAGACTCTGAAGGATGATGGACAAGCAAGGGCATTTGATTGGTATAAGAGGGTGAATGTCGTTAAAGATGTAGCAAATGCTTTGTTCTATATGCACCATGAATGCTCACCTCGAATTGTTCATCGTGATATATCAAGCAAGAATGTTCTTTTGGATTCCGAATATGTAGCTCATGTCTCAGACTTTGGAACAGCCAAGTTTCTTAATCCCGATTCATCCAATTGGACCTCATTCGTAGGAACCTTTGGATATGCTGCTCCAGAACTTGCATACACAATGGAGGTGAATGAGAAATGTGATGTGTATAGTTTTGGGGTCCTAGCATTGGAAATACTTATTGGGAAGCACCCTGGTGATGTTATATCTTCTTTATTGGGATCATCTCCATCTACCCTTGTGGCCTCAACACTCGATCACATGGCATTGATGGATAAGTTGGACCAACGTCTCCCTCATCCAACAAAGCCAATTGGTAAGGAAGTGGCATCAATTGCAAAGATAGCAATGGCCTGCTTGACTGAAAGTCCACGATCTCGCCCTACCATGGAGCAGGTTGCCAATGAGCTGGTAATGGGAAGCTCATCTTCAATGGATTAG | 1527 | 0.41 | MVFIFPTLLSMKLQPLLLLLVMYFCAFAASSDIASEANALLKWKSSLDNQSHASLSSWRGNNPCNWLGIACDEFNSVSNINLTNVGLRGDLSSFDDMTSLTSIDISYNQFEGPLPNILAFHNAKIEALRNDKGLCGNVSGLEPCSTSSGKSHNHMRKKVMIVILPLTLGILILGLFAFGVSYHLCQTSTNKEDQATSIQTPNIFAIWSFDGKMVFENIIEATEDFDDKHLIGVGGQGCVYKAVLPTGQVVAVKKLHSVPNGEMLNLKAFTCEIQALTEIRHRNIVKLYGFCSHSQFSFLVCEFLENGCVEKTLKDDGQARAFDWYKRVNVVKDVANALFYMHHECSPRIVHRDISSKNVLLDSEYVAHVSDFGTAKFLNPDSSNWTSFVGTFGYAAPELAYTMEVNEKCDVYSFGVLALEILIGKHPGDVISSLLGSSPSTLVASTLDHMALMDKLDQRLPHPTKPIGKEVASIAKIAMACLTESPRSRPTMEQVANELVMGSSSSMD* | 509 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso16g0532 | 508 | Gene3D | Transferase(Phosphotransferase) domain 1 | 304 | 506 | - | - | |
Gso16g0532 | 508 | SUPERFAMILY | Protein kinase-like (PK-like) | 204 | 499 | IPR011009 | - | |
Gso16g0532 | 508 | Gene3D | Phosphorylase Kinase; domain 1 | 184 | 303 | - | - | |
Gso16g0532 | 508 | Gene3D | Ribonuclease Inhibitor | 94 | 153 | IPR032675 | - | |
Gso16g0532 | 508 | Gene3D | Ribonuclease Inhibitor | 30 | 93 | IPR032675 | - | |
Gso16g0532 | 508 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 9 | 92 | - | - | |
Gso16g0532 | 508 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 87 | 505 | - | - | |
Gso16g0532 | 508 | SUPERFAMILY | L domain-like | 35 | 119 | - | - | |
Gso16g0532 | 508 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 349 | 361 | IPR008266 | GO:0004672|GO:0006468 | |
Gso16g0532 | 508 | Pfam | Leucine rich repeat N-terminal domain | 34 | 72 | IPR013210 | - | |
Gso16g0532 | 508 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 87 | 505 | - | - | |
Gso16g0532 | 508 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 9 | 92 | - | - | |
Gso16g0532 | 508 | ProSiteProfiles | Protein kinase domain profile. | 225 | 501 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso16g0532 | 508 | Pfam | Protein kinase domain | 226 | 498 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso16g0532 | Gso-Chr16 | 6420996 | 6426009 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso16g0532 | 68 | 397 | Receptor kinase-like Gene Family | AT4G08850 | 46.176 | 4.80e-93 | 303 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Gso16g0532 | Pkinase | 8.5e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso16g0532 | - | - | gmx:100787487 | 944.88 |