Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0529 ATGAGTCACAACTCCTTGAATGGAACTATTCCTCCTCAAATTGGTTCCTTATCCAATCTCAACACTCTTGACTTGTCCATTAATAACCTCTTTGGTAGCATTCCCAATACCATTGGTAATCTCTCCAAACTCTTGTTTCTTAATCTTTCTGACAATGATCTCTCTGGTACCATTCCTTTCACCATTGGAAATTTGTCAAAGCTTAGTGTATTATCTATATCCTTTAATGAACTCACTGGATCAATTCCTTCCACTATTGGAAATTTATCAAAAGTCAGGACATTAAGAATTATTGGAAATGAACTTGGTGGCAAGATTCCAATAGAACTGAGCATGCTTACTGCTCTGGAAAGTTTGCAGCTAGCTGGCAATAATTTTATAGGCCATTTACCTCAAAACATTTGCATTGGTGGAACGTTGAAAATTTTTGCCGCTGAAAATAACAACTTCATAGGCCCAATTCCGGTGAGTTTGAAGAATTGCTCCAGCCTTATAAGAGTCAGGCTTCAGCGAAACCAGCTAACTGGGGATATAACAGATGCTTTTGGTGTACTTCCAAATTTGGACTACATCGAATTGAGTGACAATAACTTTTATGGTCAACTTTCACCTAACTGGGGAAAGTTTCGTAGCCTCACAAGCCTCATGATCTCCAACAATAATTTATCAGGTGTGATACCACCAGAACTAGCTGGGGCAACCAAATTACAACGACTTCACCTGTCCTCAAACCATCTTACAGGAAACATTCCACATGATTTATGTAACTTGCCCTTGTTTGATCTCTCACTCGACAACAATAATCTTACAGGAAATGTTCCCAAAGAAATAGCATCAATGCAGAAACTTCAAATTTTGAAGCTTGGATCAAATAAGTTGTCTGGCTTAATCCCAAAACAACTAGGAAATTTGCTCAATTTATTGAACATGAGTCTGAGCCAAAATAATTTTCAGGGAAATATTCCTTCAGAGCTTGGCAAACTGAAATTTCTTACGAGTCTTGATCTTGGTGGAAATTCATTGAGAGGAGCAATACCTTCAATGTTTGGAGAATTAAAAAGCTTAGAAACACTGAATCTCTCTCACAATAATCTTTCAGGTAATCTCTCTAGCTTCGATGATATGACGAGCTTGACATCTATTGATATATCATACAACCAGTTTGAGGGTCCACTTCCAAACATTCTAGCCTTCCACAATGCTAAAATTGAAGCATTGAGAAATAATAAAGGCGTGTGTGGCAATGTCACTGGCTTGGACCCTTGCTCAACATCAAGTGGGAAATCTCATAATCATATGAGGAAGAAAATAATAATAGTAATTTTACCCCTTACTTTGGGTATTCTAATACTGGCATTATTTGCTTTCGGAGTCTCGTATCATTTATGCCAAACCTCAACGAAAAAAGAAGACCAGGCTACAAATATACAAACTCCAGACATATTTGCAATATGGAATTTTGATGGCAAAATGGTGTTCGAGAATATTATTGAAGCCACAGAAGATTTTGACGACAAACATCTCATTGGTGTTGGAGGGCAAGGATGTGTTTACAAAGCAGTGCTCCCTGCAGGTCAAGTTGTTGCTGTGAAGAAACTCCATTCAGTTCCAAATGGAGAGATGCTCAATCTGAAAGCTTTCACATGTGAGATCCAAGCTTTGACAGAAATTCGACATCGTAACATTGTAAAGTTATATGGGTTTTGTTCACATTCACAATTCTCATTTTTGGTGTGTGAATTCCTGGAGAACGGCAGTGTTGAGAAGACTCTGAAGGATGATGGACAAGCAATGGCATTTGATTGGTATAAGAGGGTGAATGTTGTTAAAGATGTAGCAAATGCTTTGTGCTATATGCACCATGAATGCTCACCTCGAATTGTTCATCGTGATATATCAAGCAAGAATGTTCTTTTGGATTCCGAATATGTAGCTCATGTCTCAGACTTTGGAACAGCCAAGTTTCTTAATCCAGATTCATCCAATTGGACCTCATTCGTAGGAACCTTTGGATATGCTGCTCCAGAACTTGCATACACAATGGAGGTGAATGAGAAATGTGACGTGTATAGTTTTGGGGTCCTAGCATGGGAAATACTTTTTGGGAAGCACCGTGGTGATGTTATTATATCTTCTTTATTGCGATCATCTCCATCTACTCTTGTGTCCTCAACACTCGATCACATGGCATTGATGGATAAGTTGGACCCACGTCTCCCTCATCCAACAAAGCCAATTGGTAAGGAAGTGGCATCAATTGTAAAGATAGCAATGGCCTGCTTGACTGAAAGTCCACGATCTCGCCCTACCATGGAGCAGGTTGCCAATGAGCTGGTAATGGGAAGCTCATCTTCAATGGATTAG 2364 0.3913 MSHNSLNGTIPPQIGSLSNLNTLDLSINNLFGSIPNTIGNLSKLLFLNLSDNDLSGTIPFTIGNLSKLSVLSISFNELTGSIPSTIGNLSKVRTLRIIGNELGGKIPIELSMLTALESLQLAGNNFIGHLPQNICIGGTLKIFAAENNNFIGPIPVSLKNCSSLIRVRLQRNQLTGDITDAFGVLPNLDYIELSDNNFYGQLSPNWGKFRSLTSLMISNNNLSGVIPPELAGATKLQRLHLSSNHLTGNIPHDLCNLPLFDLSLDNNNLTGNVPKEIASMQKLQILKLGSNKLSGLIPKQLGNLLNLLNMSLSQNNFQGNIPSELGKLKFLTSLDLGGNSLRGAIPSMFGELKSLETLNLSHNNLSGNLSSFDDMTSLTSIDISYNQFEGPLPNILAFHNAKIEALRNNKGVCGNVTGLDPCSTSSGKSHNHMRKKIIIVILPLTLGILILALFAFGVSYHLCQTSTKKEDQATNIQTPDIFAIWNFDGKMVFENIIEATEDFDDKHLIGVGGQGCVYKAVLPAGQVVAVKKLHSVPNGEMLNLKAFTCEIQALTEIRHRNIVKLYGFCSHSQFSFLVCEFLENGSVEKTLKDDGQAMAFDWYKRVNVVKDVANALCYMHHECSPRIVHRDISSKNVLLDSEYVAHVSDFGTAKFLNPDSSNWTSFVGTFGYAAPELAYTMEVNEKCDVYSFGVLAWEILFGKHRGDVIISSLLRSSPSTLVSSTLDHMALMDKLDPRLPHPTKPIGKEVASIVKIAMACLTESPRSRPTMEQVANELVMGSSSSMD* 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0529 787 SUPERFAMILY L domain-like 159 414 - -
Gso16g0529 787 Gene3D Phosphorylase Kinase; domain 1 462 581 - -
Gso16g0529 787 Pfam Leucine Rich Repeat 235 257 IPR001611 GO:0005515
Gso16g0529 787 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 784 - -
Gso16g0529 787 Gene3D Ribonuclease Inhibitor 64 137 IPR032675 -
Gso16g0529 787 Gene3D Ribonuclease Inhibitor 138 425 IPR032675 -
Gso16g0529 787 Pfam Leucine rich repeat 331 388 IPR001611 GO:0005515
Gso16g0529 787 SUPERFAMILY Protein kinase-like (PK-like) 486 778 IPR011009 -
Gso16g0529 787 Gene3D Ribonuclease Inhibitor 1 63 IPR032675 -
Gso16g0529 787 ProSitePatterns Tyrosine protein kinases specific active-site signature. 627 639 IPR008266 GO:0004672|GO:0006468
Gso16g0529 787 SUPERFAMILY L domain-like 2 228 - -
Gso16g0529 787 ProSiteProfiles Protein kinase domain profile. 503 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0529 787 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 784 - -
Gso16g0529 787 Pfam Protein kinase domain 504 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0529 787 ProSiteProfiles Leucine-rich repeat profile. 354 376 IPR001611 GO:0005515
Gso16g0529 787 SMART LRR_typ_2 352 374 IPR003591 -
Gso16g0529 787 SMART LRR_typ_2 65 89 IPR003591 -
Gso16g0529 787 SMART LRR_typ_2 209 233 IPR003591 -
Gso16g0529 787 SMART LRR_typ_2 113 137 IPR003591 -
Gso16g0529 787 SMART LRR_typ_2 280 303 IPR003591 -
Gso16g0529 787 SMART LRR_typ_2 375 398 IPR003591 -
Gso16g0529 787 SMART LRR_typ_2 234 257 IPR003591 -
Gso16g0529 787 SMART LRR_typ_2 328 351 IPR003591 -
Gso16g0529 787 SMART LRR_typ_2 17 41 IPR003591 -
Gso16g0529 787 Gene3D Transferase(Phosphotransferase) domain 1 582 785 - -
Gso16g0529 787 PRINTS Leucine-rich repeat signature 331 344 - -
Gso16g0529 787 PRINTS Leucine-rich repeat signature 352 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0529 Gso-Chr16 6369807 6372411 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0529 1 675 Receptor kinase-like Gene Family AT4G08850 46.706 0.0 601
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso16g0529 Pkinase 4.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0529 - - gsj:114391017 1513.05