Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0528 ATGGTGTTCATATTTCCAACGCTTCTGTCCATGAAGCTCCAACCACTTTTGCTGCTTCTTGTGATGTACTTCTGTGCATTTGCTGCTTCTTCTGAGATTGCTTCAGAAGCAAATGCTTTGTTGAAGTGGAAATCCAGCCTTGACAACCAAAGTCATGCTTCTCTCTCTTCATGGAGTGGCAATAATCCTTGCAATTGGTTCGGAATTGCATGTGATGAGTTCACTTCTGTTTCCAACATAAATCTTTCAAATGTTGGATTAAGAGGTGATCTCTCTAGCTTCGATGATATGACGAGCTTGACATCTATTGATATATCATACAACCAGTTTGAGGGTCCACTTCCAAACATTCTAGCCTTCCACGACGCTAAAATTGAAGCATTGAGAAATAATAAAGGCTTGTGTGGCAATGTCACTGGCTTGGAGCGTTGCTCAACATCAAGTGGGAAATCTCATAATCATATGAGGAAGAAAGTAATGATAGTAATTTTACCTCTTACTTTGGGCATTCTAATACTGGCATTATTTGCTTTCGGAGTCTCGTATCATTTATGCCAAACCTCAACGAACAAAGAAGACCAGGCTACAAGTATACAAACTCCTAACATATTTGCAATATGGAGTTTTGATGGCAAAATGGTATTGGAGAATATTATTGAAGCCACAGAAGATTTTGACGACAAACATCTCATTGGTGTTGGAGGGCAAGGATGTGTTTACAAAGCAGTGCTGCCTACAGGTCAAGTTGTTGCTGTGAAGAAACTCCATTCAGTTCCAATTGGAGAGATGCTCAATCTGAAAGCTTTCACATGTGAGATCCAAGCTTTGACAGAAATTCGACATCGTAACATTGTAAAGTTATATGGGTTTTGTTCACATTCACAATTCTCATTTTTGGTGTGTGAATTCCTGGAGAATGGCAGTGTTGAGAAGACTCTGAAGGATGATGGACAAGCAATGGCATTTGATTGGTATAAGAGGGTGAATGTTGTTAAAGATGTAGCAAATGCTTTGTGCTATATGCACCTTGAATGCTCACCTCGAATTGTTCATCGTGATATATCAAGCAAGAATGTTCTTTTGGATTCCGAATATGTAGCTCATGTCTCAGACTTTGGAACAGCCAAGTTTCTTAATCCAGATTCATCCAATTGGACCTCATTCGTAGGAACCTTTGGATATGCTGCTCCAGAACTTGCATACACAATGGAGGTGAATGAGAAATGTGACGTGTATAGTTTTGGGGTCCTAGCATGGGAAATACTTATTGGGAAGCACCCTGGTGATGTTATATCTTCTTTATTGGGATCATCTCCATCTACTCTTGTGGCCTCAACACTCGATCACATGGCATTGATGGATAAGTTGGACCAACGTCTCCCTCATCCAACAAAGCCAATTGGTAAGGAAGTGGCATCAATTGCAAAGATAGCAATGGCCTGCTTGACTGAAAGTCCACGATCTCGCCCTACCATGGAGCAGGTTGCCAATGAGCTGGTAATGTCAAGCTCATCTTCAATGGATTAG 1527 0.408 MVFIFPTLLSMKLQPLLLLLVMYFCAFAASSEIASEANALLKWKSSLDNQSHASLSSWSGNNPCNWFGIACDEFTSVSNINLSNVGLRGDLSSFDDMTSLTSIDISYNQFEGPLPNILAFHDAKIEALRNNKGLCGNVTGLERCSTSSGKSHNHMRKKVMIVILPLTLGILILALFAFGVSYHLCQTSTNKEDQATSIQTPNIFAIWSFDGKMVLENIIEATEDFDDKHLIGVGGQGCVYKAVLPTGQVVAVKKLHSVPIGEMLNLKAFTCEIQALTEIRHRNIVKLYGFCSHSQFSFLVCEFLENGSVEKTLKDDGQAMAFDWYKRVNVVKDVANALCYMHLECSPRIVHRDISSKNVLLDSEYVAHVSDFGTAKFLNPDSSNWTSFVGTFGYAAPELAYTMEVNEKCDVYSFGVLAWEILIGKHPGDVISSLLGSSPSTLVASTLDHMALMDKLDQRLPHPTKPIGKEVASIAKIAMACLTESPRSRPTMEQVANELVMSSSSSMD* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0528 508 Gene3D Ribonuclease Inhibitor 29 92 IPR032675 -
Gso16g0528 508 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 9 92 - -
Gso16g0528 508 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 87 505 - -
Gso16g0528 508 ProSiteProfiles Protein kinase domain profile. 225 501 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0528 508 Pfam Protein kinase domain 226 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0528 508 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Gso16g0528 508 ProSitePatterns Tyrosine protein kinases specific active-site signature. 349 361 IPR008266 GO:0004672|GO:0006468
Gso16g0528 508 Gene3D Ribonuclease Inhibitor 93 148 IPR032675 -
Gso16g0528 508 Gene3D Phosphorylase Kinase; domain 1 184 303 - -
Gso16g0528 508 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 87 505 - -
Gso16g0528 508 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 9 92 - -
Gso16g0528 508 Gene3D Transferase(Phosphotransferase) domain 1 304 507 - -
Gso16g0528 508 SUPERFAMILY L domain-like 34 118 - -
Gso16g0528 508 SUPERFAMILY Protein kinase-like (PK-like) 205 500 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0528 Gso-Chr16 6346890 6350257 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0528 68 397 Receptor kinase-like Gene Family AT4G08850 46.176 4.05e-90 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso16g0528 Pkinase 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0528 - - gmx:100787487 932.939