Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0462 ATGGCGATGGAAGTGGAGCAGAATCAGAATCATCAATTAGGGTTTCCCTTCTGGAAACCGCTCCGTCGCAGGTTCGGACCCGAATCTCCTTTCTTCGCTCATGGCAACCTCGAACGGGAACTTCTCGCCAAACAGCTTGCTTTGGAATTAACAGAAGAGAAACAACAGCTTGAGAAATGGATGCAAGAGGAAGAAGGAAGGGAAGTCTTTTGTCCCATTGTGGGTTGTGGTGCACGCTTGACCTCAATGGAGGACTTTGAAAATCACTATAATGCAAGGCATACTGCATCCTGTTCTGTGTGCTCCAGAGTTTACCCGACATCTTGGTTGCTCAGCATACATGTATCTGAAGTGCATGATTCTTTCTTTCAGGCAAAAGTTGCACGTGGCTATGATATGTACGAATGCTTGGTGGAAAGGTGTGGATTGAAATTCAAAAGCTACAATAGTAGGCAGCAGCATCTGGTTGACAAGCATAAATTCCCCACCTCATTTGAGTTTTTCAAGAAGGCTAAGCCTTCAAAGAAACATAGGTTGAAGTCCCAACGCAAACAAGCTGTTTGTAAGGAGGATTCTTCAGGAATGATGGAAGTGGAAAATGCATCCATGGATGACCTTGTTTCAGCAGTCTCTAAATTGAACACTTCTGACTCCACCCCTTCATCAATCAGTTTTGGTCGCCGCCACAAAGGCTTGTCATTTGTCCCTCGAGCTGTTCAGCGTGGAGGTGGATCAAACTCAACAGCATCTGTGACAAAGAAATAA 765 0.451 MAMEVEQNQNHQLGFPFWKPLRRRFGPESPFFAHGNLERELLAKQLALELTEEKQQLEKWMQEEEGREVFCPIVGCGARLTSMEDFENHYNARHTASCSVCSRVYPTSWLLSIHVSEVHDSFFQAKVARGYDMYECLVERCGLKFKSYNSRQQHLVDKHKFPTSFEFFKKAKPSKKHRLKSQRKQAVCKEDSSGMMEVENASMDDLVSAVSKLNTSDSTPSSISFGRRHKGLSFVPRAVQRGGGSNSTASVTKK* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0462 254 PANTHER ZINC FINGER PROTEIN 511 11 241 - -
Gso16g0462 254 ProSitePatterns Zinc finger C2H2 type domain signature. 98 119 IPR013087 -
Gso16g0462 254 PANTHER UNCHARACTERIZED 11 241 IPR039258 -
Gso16g0462 254 SMART c2h2final6 96 119 IPR013087 -
Gso16g0462 254 SMART c2h2final6 134 159 IPR013087 -
Gso16g0462 254 SMART c2h2final6 69 94 IPR013087 -
Gso16g0462 254 MobiDBLite consensus disorder prediction 234 254 - -
Gso16g0462 254 Coils Coil 43 67 - -
Gso16g0462 254 MobiDBLite consensus disorder prediction 240 254 - -
Gso16g0462 254 ProSitePatterns Zinc finger C2H2 type domain signature. 136 159 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0462 1 250 C2H2 Transcription Factor Family AT5G14140 63.218 2.20e-111 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Gso16g0462 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0462 - - gmx:100819557 494.582