Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0461 ATGGAGAAAAGCATGAGGATGGTATTAATGGCTTTGTTGGCTTTCACGATGCTTTTATCTAAGGGTGAAGGCCAATTAGTAGAGAATTTCTACAGTTTATCTTGTCCAAACGTGGAATCCATCGTGAAACAAGCAGTGACTAACAAGTTTACACAGACCATTACAACTGGACAAGCAACTCTGCGTCTCTTTTTCCATGATTGCTTTGTTGAGGGTTGTGATGCCTCAGTGATAATCTCGTCGCCAAATGGGGACGCAGAGAAGGATGCAGAGGAGAATATTTCACTACCAGGAGATGGGTTTGACACTGTCATCAAGGCAAAGCAAGCAGTGGAATCTTCATGTCCTGGAGTGGTTTCATGTGCAGACATTTTGGCACTTGCTACCAGAGACGTTATAGGCTTGCTTGGAGGTCCTTCATTCAACGTAGAGCTTGGACGCAAAGACGGGCTTATTTCCAAGGCATCAAGTGTAGAAGGAAACCTTCCGAAAGCAAACTTCAATTTGGACCAACTCAACGCGCTTTTCTCAAAGCACGGCCTCAGCCAAACGGACATGATAGCGTTATCTGGGGCCCACACAGTGGGCTTCTCGCACTGTGACCAGTTCGCGAACCGTTTATATTCCTTCTCGTCCTCCAACACGGTGGACCCCACTCTGGACCCCAGTTACGCCCAGGACCTAATGGCGGGGTGCCCTAGGAACCCCGACCCCACTGTAGCGGTTGCCCTGGACCCACAATCCCCTGCGGCCTTCGACAACTTGTATTACCAAAACCTGCTGTCGGGGAAAGGGTTGCTAACCTCAGACCAGGTTCTGTTCGAGGATGCCACGTCACAACCAACTGTTGTTAGGTTCGCCAACAACGTTGCGGATTTTAACGATGCCTTTGTCGCAGCCATCAGGAAGCTTGCAAGGGTTGGGGTCAAGACTGGGAATGATGGAGAGATTCGGAGAGATTGCACCACATTCAATTCTTGA 981 0.4913 MEKSMRMVLMALLAFTMLLSKGEGQLVENFYSLSCPNVESIVKQAVTNKFTQTITTGQATLRLFFHDCFVEGCDASVIISSPNGDAEKDAEENISLPGDGFDTVIKAKQAVESSCPGVVSCADILALATRDVIGLLGGPSFNVELGRKDGLISKASSVEGNLPKANFNLDQLNALFSKHGLSQTDMIALSGAHTVGFSHCDQFANRLYSFSSSNTVDPTLDPSYAQDLMAGCPRNPDPTVAVALDPQSPAAFDNLYYQNLLSGKGLLTSDQVLFEDATSQPTVVRFANNVADFNDAFVAAIRKLARVGVKTGNDGEIRRDCTTFNS* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0461 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Gso16g0461 326 PANTHER PEROXIDASE 7 326 - -
Gso16g0461 326 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Gso16g0461 326 Pfam Peroxidase 42 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g0461 326 Gene3D Peroxidase, domain 2 163 304 - -
Gso16g0461 326 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g0461 326 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g0461 326 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g0461 326 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g0461 326 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g0461 326 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g0461 326 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g0461 326 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g0461 326 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g0461 326 SUPERFAMILY Heme-dependent peroxidases 25 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso16g0461 326 CDD secretory_peroxidase 25 321 IPR033905 GO:0004601|GO:0042744
Gso16g0461 326 ProSiteProfiles Plant heme peroxidase family profile. 25 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g0461 326 PANTHER - 7 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g0461 326 Gene3D - 29 325 - -
Gso16g0461 326 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g0461 326 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g0461 326 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g0461 326 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g0461 326 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0461 Gso-Chr16 5453318 5457223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0461 2 325 Peroxidase AT5G14130 62.963 1.02e-147 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0461 K00430 - gmx:100812082 646.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0797 19 32461677 32466116 Gso16g0461 16 5453318 5457223 GST