Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0460 ATGGGGGTGTTACAGGAGAAGCTCTCGTCGTTCTACAAGAGCCGCTGGCTGGTTTTCGTGGCCGCAATGTGGCTGCAGTCGTGGGCGGGCATCGGGTACTTGTTCGGGAGCATTTCGCCCGTCATAAAGAGCTCTCTGGGCTACAACCAGAAGCAGCTCGCCATGCTCGGCGTCGCCAAGGACCTTGGCGACGCCGTCGGCTTCATGACGGGCCTGCTCTGCGAGATTTTGCCCATCTGGGGCGCGCTTCTCGTCGGCGCTGCTTTGAACGTCGTGGGATATGGCTGGGTCTGGCTTGTTGTCACTTCTCAAGTCCCCGTCTTGCCTGTTTGGGCTATGTGTGCTCTTATCTTTGTTGGAACAAATGGTGAAACCTACTTCAACACGGTTTCTCTGGTGTCTTGTGTACAAAATTTCCCCAAAAGCCGGGGTCCTGTGGTGGGAATTCTAAAGGGCTTTGCTGGGTTGAGTGGTGCAATCTTGACTCAGATATATGCACTGTTCCATTCCCCTAATCAAGCATCATTAATATTTATGGTTGCTGTTGGTCCATCATTGGTAGGAATAGGTCTTATGTTCATTGTTAGGCCTGTTGGAGGTCACAAACAAGTTAGGCCATCAGATGGAAAATGCTTCACATTGATCTATGGTGTGTGCCTCCTGTTGGCTGCATATTTGTTGGGAGTCATGGTTGTCCAAGATTTGGTTGAAGTGAGTGAAACTGTAATCTCAATATTCACAGGGGTTCTCTTGTTGATCCTCCTTGTCCCAATTGTTATTCCCATTACATTGACTTTTGGCCCAGAGCAAAGGCATCCGGAGGAAGAGGCACTTCTTCCACCACCACAGAATAAAGAAGCAGGGAAATCTCAGCTGGATTCTGATGAAGTGATACTGAGCGAGTTGGAAGATGAGAAGCCTAAGGAAGTGGACATGCTCCCTGCATCAGAGAGGCAGAAACGTATCGCGCACTTGCAACAAAGACTGCTCCAAGCAGCTGCAGAAGGAGCAGTGAGGGTTAAGAGAAGGAGAGGACCACACAGAGGGGAAGATTTCACCTTGACACAAGCATTGATCAAAGCAGACTTTTGGCTTCTTTTCATTTCCATGATCATGGGTTCTGGATCCGGATTGACTGTAATCGACAATCTGGGTCAGATGAGCCAGTCTCTAGGATTCGACAATGCACATATATTTGTTTCCATGATCAGTATTTGGAACTTCCTTGGCCGTGTCGGAGGAGGTTACATATCTGAGCTTGTTGTGAGGGATCATGCATATCCAAGGCCAGTTGCATTGGCTGTATTTCAACTCATTATGACTCTTGGGCATGTTTTCCTTGGTATGGGATGGCCAGGGTCAATGTATGTTGGCACGTTACTAGTTGGACTTGGTTATGGAGCTCATTGGGCAATTGTTCCAGCTACAGCCTCAGAGTTGTTTGGTTTGAGAAACTTTGGTGCTTTGTACAATTTCATTACTATAGCAAACCCTGCAGGAACCCTGGTTTTCTCTAGTCTCATTGCCAGCACCATCTATGATGCTGAAGCAGAGAAACAACATCGCCAAAATATGATTTTGCAAGTGCTGAATGCCAGTGAGCCTCTAAAGTGCGAAGGTTCCGTATGCTTTTTCCTAACATCCATGATCATGGCAGGATTATGCGTTGTTGGAGCAGGCCTATGCATGGTTCTGGTGTTAAGAACAAGAATTGTTTATGCCAACCTATATGGAAAAGCTTCTTCTAGCAGACTTCGATTATGA 1764 0.4739 MGVLQEKLSSFYKSRWLVFVAAMWLQSWAGIGYLFGSISPVIKSSLGYNQKQLAMLGVAKDLGDAVGFMTGLLCEILPIWGALLVGAALNVVGYGWVWLVVTSQVPVLPVWAMCALIFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYALFHSPNQASLIFMVAVGPSLVGIGLMFIVRPVGGHKQVRPSDGKCFTLIYGVCLLLAAYLLGVMVVQDLVEVSETVISIFTGVLLLILLVPIVIPITLTFGPEQRHPEEEALLPPPQNKEAGKSQLDSDEVILSELEDEKPKEVDMLPASERQKRIAHLQQRLLQAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLLFISMIMGSGSGLTVIDNLGQMSQSLGFDNAHIFVSMISIWNFLGRVGGGYISELVVRDHAYPRPVALAVFQLIMTLGHVFLGMGWPGSMYVGTLLVGLGYGAHWAIVPATASELFGLRNFGALYNFITIANPAGTLVFSSLIASTIYDAEAEKQHRQNMILQVLNASEPLKCEGSVCFFLTSMIMAGLCVVGAGLCMVLVLRTRIVYANLYGKASSSRLRL* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0460 587 SUPERFAMILY MFS general substrate transporter 212 570 IPR036259 -
Gso16g0460 587 Pfam Nodulin-like 15 262 IPR010658 -
Gso16g0460 587 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 580 - -
Gso16g0460 587 Gene3D MFS general substrate transporter like domains 359 579 IPR036259 -
Gso16g0460 587 CDD MFS_Mch1p_like 14 559 - -
Gso16g0460 587 SUPERFAMILY MFS general substrate transporter 9 201 IPR036259 -
Gso16g0460 587 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 3 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0460 Gso-Chr16 5440964 5445451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0460 5 582 Nodulin-like Gene Family AT5G14120 69.707 0.0 821
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0460 - - gmx:100818484 1130.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0799 19 32596606 32601136 Gso16g0460 16 5440964 5445451 GST