Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0456 ATGGGTGTGGCTTGGTCTGGACAAAGAGTTGAAGAGGCAAAGTTGAAACCACTGCCAACCAGGAATGGAGGTTGCAACAAACACAACCGCGACCACGTCAAATTCATTCGATGCTCTAACTGTGGAAAATGCTGCCCTAAGGACAAGGCTATTAAGAGGTTTCTGGTGAGGAACATTGTTGAACAGGCTGCAGTCAGAGATGTGTTGGAAGCCTGTAATATACTCTTTCCCAAACTGTATGTGAAGATGCAGTATTGTGTTTCCTGTGATATCCACTCCATGCTAGGGTATGCTCCTGCACTGATAAGAATAATTGTGAGCCTCCAAAGCGATTCATCAGGTGCATGGATGATGCACAAAGGCCCGGTCAGCCTGGTTAGTGGTCAAGCACCTCGTCCTGCTGGCATTGGAGCACCTGTCCGAACCTAA 429 0.4779 MGVAWSGQRVEEAKLKPLPTRNGGCNKHNRDHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVLEACNILFPKLYVKMQYCVSCDIHSMLGYAPALIRIIVSLQSDSSGAWMMHKGPVSLVSGQAPRPAGIGAPVRT* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0456 142 Gene3D Ribosomal protein S26e 17 95 IPR038551 -
Gso16g0456 142 Pfam Ribosomal protein S26e 21 94 IPR000892 GO:0003735|GO:0005840|GO:0006412
Gso16g0456 142 PANTHER 40S RIBOSOMAL PROTEIN S26 20 142 - -
Gso16g0456 142 PANTHER 40S RIBOSOMAL PROTEIN S26 20 142 IPR000892 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0456 Gso-Chr16 5393673 5396548 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0456 21 95 Cytoplasmic Ribosomal Protein Gene Family AT3G56340 75.641 2.74e-36 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0456 K02976 - gmx:100811014 297.745