Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0446 ATGGAGAATTATTCTATGTTGTTCCCTATTTCCAATTCCTCGAGCTACCCAATTTCAACGAGTGGTGTTGGAAGCTCTCAAATCGGCTATAATGGTCAAAGCTCCAATGCGTTTCTTGGTCTAAGGCCTAGTAATGAATTATTAGGTAGTGATGATCATGACAACGGAGGCGAAGGTGGTGGTGATGGAGATGGCAACATGTTAATGTCTCAGATAAGTGGTGGTAGTAATACTAATGTGAGTGATGAGTTAGGTGGTTCCGGAAATAGTAACAATAAAAAGAAAGGAGAGAAGAAGGTTAAAAAGCCTAGATATGCTTTTCAAACTAGGAGCCAGGTTGATATTCTTGATGATGGTTATCGATGGAGGAAGTATGGCCAAAAAGCTGTTAAAAACAACAAATTTCCAAGGAGCTACTACAGGTGCACGCATCAAGGGTGCAATGTGAAGAAGCAAGTGCAACGGCTAACCAAAGACGAAGGGGTAGTGGTGACCACTTATGAGGGAGTGCACACACACCCAATTGAAAAGACAACAGATAACTTTGAGCACATTTTGAGTCAGATGAAAATATACACTCCCTTTTAA 588 0.4099 MENYSMLFPISNSSSYPISTSGVGSSQIGYNGQSSNAFLGLRPSNELLGSDDHDNGGEGGGDGDGNMLMSQISGGSNTNVSDELGGSGNSNNKKKGEKKVKKPRYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMKIYTPF* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0446 195 Gene3D WRKY domain 101 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso16g0446 195 Pfam WRKY DNA -binding domain 117 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso16g0446 195 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 85 191 IPR044810 GO:0003700
Gso16g0446 195 ProSiteProfiles WRKY domain profile. 111 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso16g0446 195 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 85 191 - -
Gso16g0446 195 MobiDBLite consensus disorder prediction 41 104 - -
Gso16g0446 195 SMART WRKY_cls 116 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso16g0446 195 MobiDBLite consensus disorder prediction 69 91 - -
Gso16g0446 195 SUPERFAMILY WRKY DNA-binding domain 108 175 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0446 Gso-Chr16 5283116 5285607 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0446 104 195 WRKY Transcription Factor Family AT5G13080 86.957 1.42e-58 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso16g0446 WRKY 1.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0446 - - gmx:100788382 343.199