Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0437 ATGGAAATGGCTAATGGAAACGGTTTCCAACTTAGTGTGAAGAAGCTAAGTGAACCAACTCTAGTTCCTCCTGCTGAAGAAACAAAGAAGGGTTTGTATTTCCTATCTAACCTTGACCAGAACATTGCTGTGATTGTGAGAACCGTTTACTGCTTCAAAACTGATGAGAGGGGGAATGAGAAGGCTGGGGAAGTGATGAAGAATGCTTTGAGGAAGGTTCTTGTCCACTATTACCCTCTTGCTGGGAGGCTTACTATAAGCTCAGAGGGTAAACTCATAGTGGATTGCACAGGTGAAGGTGCCTTGTTTGTGGAGGCTGAGGCAAACTGTTCCATGGAAGAGATTGGTGACATCACAAAGCCTGACCCTGGGACTCTTGGTATGCTTGTTTATGACATTCCTGAAGCAAAACACATTCTTCAGATGCCTCCTTTGGTTGCTCAGGTGACCAAGTTCAAATGTGGAGGCTTTGCACTTGGGCTGTGCATGAACCACTGCATGTTTGATGGAATTGGTGCAATGGAATTTGTGAACTCTTGGGGAGAAGCAGCCAGAGACTTGCCACTCTCAATCCCTCCAGTGCTAGACAGAAGCATGCTCAAGGCAAGAAACCCTCCAAAGATAGAGCACCTGCACCAAGAATTTGCTGACATTGAAGACAAGTCCAGCACCAACAGCTTATATGTAGAAGATGAGATGGTCTACAGATCCTTCTGCTTTGAACCTGAGAGGCTAAAGCAGCTGAAGATGAAGGCCATGGAAGATGGAGCACTAGAGAAATGCACAACATTTGAAGTCCTCTCAGCATTTGTGTGGATAGCAAGAACCAAGGCACTTAAGTTGCTGCCAGACCAACAAACAAAGCTTCTTTTTGCTGTTGATGGGAGGGCCAAGTTCAATCCCCCTCTCCCAAAAGGGTACTTTGGGAATGGAATTGTGCTAACAAATTCTGTGTGCCAAGCTGGTGAGCTAACAGAAAAGCCCTTCTCATTTGGTGTGAGGCTCATCCAAGATGCAATCAAGATGGTCACAGACAGTTACATGAGATCAGCTATTGATTACTTTGAGGTGACAAGAGCAAGGCCTTCTCTTGCTTGCACCCTTCTCATCACAACTTGGTCTAGGCTTTCCTTTCACACCACTGATTTTGGATGGGGTGACCCTGTTCTGTCAGGGCCAGTGTCACTGCCAGAGAAGGAAGTGATTCTGTTCCTCTCTCATGGACAAGAGAGGAGGAACATCAATGTGCTTCTTGGTTTGCCTGCTCCTGTCATGAAGATTTTCCAAGATTTGATGCAGATGTAA 1305 0.4582 MEMANGNGFQLSVKKLSEPTLVPPAEETKKGLYFLSNLDQNIAVIVRTVYCFKTDERGNEKAGEVMKNALRKVLVHYYPLAGRLTISSEGKLIVDCTGEGALFVEAEANCSMEEIGDITKPDPGTLGMLVYDIPEAKHILQMPPLVAQVTKFKCGGFALGLCMNHCMFDGIGAMEFVNSWGEAARDLPLSIPPVLDRSMLKARNPPKIEHLHQEFADIEDKSSTNSLYVEDEMVYRSFCFEPERLKQLKMKAMEDGALEKCTTFEVLSAFVWIARTKALKLLPDQQTKLLFAVDGRAKFNPPLPKGYFGNGIVLTNSVCQAGELTEKPFSFGVRLIQDAIKMVTDSYMRSAIDYFEVTRARPSLACTLLITTWSRLSFHTTDFGWGDPVLSGPVSLPEKEVILFLSHGQERRNINVLLGLPAPVMKIFQDLMQM* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0437 434 Pfam Transferase family 19 432 - -
Gso16g0437 434 Gene3D - 15 216 IPR023213 -
Gso16g0437 434 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 13 433 - -
Gso16g0437 434 Gene3D - 217 433 IPR023213 -
Gso16g0437 434 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 13 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0437 Gso-Chr16 5126484 5129090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0437 15 432 Monolignol Biosynthesis Gene Families AT5G48930 35.321 2.27e-81 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0437 K15400 - gmx:100792433 876.315