Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0435 ATGATGAATTCATTGTGTGGAAGCTCAGTGTCCCTCAAGAGTGAGAACAACAACTCTAGAACCAAAGTCCAACAACCCACCACTCCTTCAAATGACTCAGTTATGCAATCCAAGAAAAACAATGCCACTCAATCCTCTGGTGATCTAGACCAAACCAGCCTAACCCCACCAAGCTTAAACCTTCCATCACTCAAATTTGACCTTGATGGAGATGTGGAAGTTCAGTCACCAGATAGTTCAATGTGGGAATCTTTTTTTGCTGACCACAATTTAGATGGTGATTTCATGATCTCTTCCCCAGTGAGGACCCCACAAGCCTCTTCCTACAATTGCAACTACAACTATGCTCAGGGAATGCAAGGCCAGAGTCTTTCAGGGTGTTCCCCACCTCGTTTCTCATCATCACAAATTGGAGCCTTCAACAGCAACAAAGGCAAAGGACTTAGCCCCCTCCACAGGGTTTTCAACTCACCCAACAATCAATACATGCAGCATGTTGAGAACCTCTCACTGCCAGCAATAGAGTTCTTGGAGGACTACCAATTAGGGTACTCTTCATCAACAACCAACAAGATGTGTTGCTCTGATCACAACAACATTGCAAGTTCATCTGAGTGCTTTGACTTGTCAATGTCTCATCAAATCCCTTCGTCCATGTTGGATGGCTTGGCACTGCACAATTCCTCCTCGAGGTACCATCGTGGATCGGTTGTCGTCGACGAAGAATCGTCGGTGCACGGTGGTGGTGCTGGTGGCTTTTCTCAGCTATCAGAAGAGAGTGACATCTATCACCAGATGGGGTCCATGGCTAGTGCTTCTCTTTCACAGGCTCTACAACAAGAACACTACCAAGAGAAGCAGCAAGCACAACAACTGCAACAACAACAACAACAGCAGCAGCAGCACCAGCAAGAGAATCTGATGGTGCCTATTCCAATAGGAGTCGAGCAGGAGCAAGACAGCGGGCTTCAACTGGTGCACCTGCTCCTGGCATGCGCGGAGGCAGTAGCCAAAGAAGAATACATGCTGGCAAGAAGGTACCTCCACCACCTCAACCGCGTCGTCACCCCCTTAGGCGACTCCATGCAGCGCGTCGCCGCCTGCTTCACCGACTCCCTAAGCGTCAGGCTCAACTCCACCCTCACTCCCAAACCTACAACACCTTCCAAACCCTTAACCCCTTCAAACTCCCTCGAGGTCCTCAAGATCTACCAGATCGTCTACCAGGCCTGTCCCTACGTCAAGTTCGCCCACTTCACCGCCAACCAGGCCATCTTCGAGGCTTTCGAGACCGAAGAACGCGTCCACGTCATCGATCTCGACATCCTCCAGGGCTACCAGTGGCCTGCCTTCATGCAGGCCCTGGCAGCCCGCCCAGCAGGCGCACCTTTTTTAAGGATCACGGGAGTGGGCCCCTCGATAGACGCTGTACGAGAAACCGGACGGTGTCTTACCGAGCTGGCCCACTCCCTACGGATCCCCTTCGAGTTCCACGCGGTCGGGGAACAACTTGAGGATCTCAAGCCACACATGTTAAACCGCCGTGTTGGGGAGGCGCTGGCGGTTAATGCGGTTAACCGCCTCCACCGCGTCCCCGGCAACCACTTGGGCAATTTGCTGACCATGCTACGTGACCAGGCACCTAGCATAGTAACTCTGGTGGAGCAAGAAGCGAGCCATAACGGACCTTACTTTCTAGGGCGTTTTCTTGAGGCATTGCATTACTACTCCGCCATTTTCGACTCGTTGGACGCCACTTTTCCGGCGGAGTCGGCGCAGCGGGCGAAGGTGGAGCAGTACATATTCGCGCCGGAGATACGAAACATCGTGGCGTGCGAGGGGCCGGAGAGGTTCGAGAGGCACGAGAGGTTAGAGAAGTGGCGGAAGATGATGGAGGGGAAGGGGTTCAAGGGAGTGGTGCTGAGTCCGAACGCGGTGACTCAGTCGAAGATATTGTTGGGGTTGTATTCATGTGAGGGGTATAGGTTGACGGAGGATAAGGGTTGCTTGTTGCTTGGGTGGCAGGATAGGGCCATCGTTGCTGCGTCTGCATGGCGCTGTTGA 2064 0.5276 MMNSLCGSSVSLKSENNNSRTKVQQPTTPSNDSVMQSKKNNATQSSGDLDQTSLTPPSLNLPSLKFDLDGDVEVQSPDSSMWESFFADHNLDGDFMISSPVRTPQASSYNCNYNYAQGMQGQSLSGCSPPRFSSSQIGAFNSNKGKGLSPLHRVFNSPNNQYMQHVENLSLPAIEFLEDYQLGYSSSTTNKMCCSDHNNIASSSECFDLSMSHQIPSSMLDGLALHNSSSRYHRGSVVVDEESSVHGGGAGGFSQLSEESDIYHQMGSMASASLSQALQQEHYQEKQQAQQLQQQQQQQQQHQQENLMVPIPIGVEQEQDSGLQLVHLLLACAEAVAKEEYMLARRYLHHLNRVVTPLGDSMQRVAACFTDSLSVRLNSTLTPKPTTPSKPLTPSNSLEVLKIYQIVYQACPYVKFAHFTANQAIFEAFETEERVHVIDLDILQGYQWPAFMQALAARPAGAPFLRITGVGPSIDAVRETGRCLTELAHSLRIPFEFHAVGEQLEDLKPHMLNRRVGEALAVNAVNRLHRVPGNHLGNLLTMLRDQAPSIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPAESAQRAKVEQYIFAPEIRNIVACEGPERFERHERLEKWRKMMEGKGFKGVVLSPNAVTQSKILLGLYSCEGYRLTEDKGCLLLGWQDRAIVAASAWRC* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0435 687 ProSiteProfiles GRAS family profile. 316 686 IPR005202 -
Gso16g0435 687 MobiDBLite consensus disorder prediction 1 62 - -
Gso16g0435 687 Pfam GRAS domain family 325 686 IPR005202 -
Gso16g0435 687 Coils Coil 275 306 - -
Gso16g0435 687 PANTHER GRAS FAMILY PROTEIN RAM1 16 685 - -
Gso16g0435 687 MobiDBLite consensus disorder prediction 1 60 - -
Gso16g0435 687 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 16 685 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0435 Gso-Chr16 5070462 5073967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0435 313 687 GRAS Transcription Factor Family AT1G66350 43.832 5.12e-99 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso16g0435 GRAS 3.3e-131 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0435 - - gmx:100775374 1289.63