Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso16g0431 | ATGGAGAATCATGATAACCTTGCAGAGAAAGAGAATTCGGCTACTAACATAACCGAAGAGACGCTACCTTCTTCTCCTTCGATCACCGATCATGAAGAAGCTGATCCCAAACCTGATGATGATCATGGTGCTGAAGCCACCGCCCAAGCTGAACCATCGTCTCCAAAGAAAGATGAGGAGGAGGCAGAGGCAGAGAAGAAAGAAGAAACCGCGTCTCCTCCGCCAAGCCTTGAGAAAGTTTCAGAAGAGATTGACCTGTTTCTCGTGACTCTGCCGAAGAAAAACGACGATGAAAATGCTGCGGAGAAGAATTTTGAGATTCCTGGCTTTTTTGAGAGATACACGGATCTGGTGGAGAAGAAGATAGCCAAATATGATGCGGAAGGGAAGGCGAAATGGGGAGAGGTGGCGGAGGAAGATTCGTGGTTGCTTGAAACCGCGAATCGGGTTTCGAAGCTGATGATGTTGCTGAATCATCATCATCATCATCTTGTTGAACCGGAGGAGGAGGAGAAAGAGAACGACGGTGGAAATGGAAAAGGAAAAGGAAAAGACTCGCTGGTGAATCGCGTTGCATCGATTCACCAGCGTGTGATGTCGTATTTGGAGGAGGACTTCAGATTTCTGATGGAAGAATGTAGAATCCCAATCGAATTAGATCCAGGAGGCAATAATAATAACAATGACACCAAAGGGAAACAACAACAACAACAACAGGTTTCATCATCGGAACAAGAAGAGGTGAAGAAAGACCAAGAAGGCGAAATCGACGAAAGTTTCCCGGGTTACTCTGAGGAGACAATTGCCAGCTTGAGCAAGATCGCCGGCGAGATGTTACCCGGCGGCTACGAATCGGAGTGCTGCCAGGTGTACATCATCTCGCGGAGGAACGCGTTCGAGGAGGTTCGCAAGAAGCTAGGGCTGGAGAGGATCAGCATCGACGACATGGTTCTGAAGGTGCAGTGGGAAACTCTCGCCGCGAACATGATCCCTGCCTGGATCAACACTCTCAAGCAGTGCGCGGCGGTGTACTTCCCCGGCGAGCGAAGGCTCGCCGAGGCCGTGTTTGCCAGCAGCCCCTCCGTCTCGGCGGGGCTCTTCGGTAGCCTCTCCCGCGGAGTTGTGATCCAGCTCCTCAACTTTGCGGAGGGCGCCGCCATGACCAAGCGCGCCGCCGAGAAGCTCTTCAAGCTCCTCGACATGTACGAGAGCCTCCGGGAGGTCATCCCAAAAGTCAACGGACTATTCCCGGATGAGTCCGTGGAGGAACTGAAGACGGAGATGAATGTCGCCAAGTCGCGACTAGGCGAGGCCGCCATCTTCATCTTCAGTGACCTAGAAAACCAGATCAAACTGGAGACCGCGAAAAGCGCGGTCCCCGGCGGAGCAGTGCACCCCCTCACACGCTACATAATGAACTACCTGAGCGTAGCGGGAGACTACAAAGAAACCCTAGAACAAGTCTTCAAAGACCATTCCAAGATCGAACGTGCAGACTCCACCAGCAGGCCGCACAGCGAAAACGACGGCGTTCCGGAGAAGCAAGCATCGTCACCGTTCGCAGGGCAGGTTCTCCGAGTCATGGACTTGCTAGACTCAAGCCTAGAAGGTAAAGGGCGTTTATACAAAGACGTTGCACTGAGCAATTTCTTCATGATGAACAACGGAAGGTACATTCTGCAGAAGATAAAAGGATCAAGCGAGATGAGCCAGGTGATGGGTGACACGTGGATAAGGAAGAAATCTTCTGAACTTAGAACATACCACAAGAACTACCAGAGAGAAACGTGGAACAGGGTGCTACAGTTTCTGAACCCGGAAGGGTTGAACGTGAACGGGAAGGTGCACAAGCCGGTGCTGAAGGAGAGGTTCAAGAGCTTCAATGCGTTGTTCGATGAGATTCACAGGACGCAGAGCTCGTGGGTGGTGAAGGACGAGCAACTTCAGTCGGAGCTTAGGGTTTCGATCTCGGGAGTGGTGGTTCCGGCCTACAGGGCCTTCATTGGGAGGTTTGCGCAGATCTTTGACCCAGGAAGACAGACTGAGAAGTACATAAAGTACCAACCTGAAGATATTGAGACCTACATTGATGAGTTGTTTGAAGGGAAACCTCACCAGTCCATTGCTAGAAGGAGAACATAA | 2142 | 0.5135 | MENHDNLAEKENSATNITEETLPSSPSITDHEEADPKPDDDHGAEATAQAEPSSPKKDEEEAEAEKKEETASPPPSLEKVSEEIDLFLVTLPKKNDDENAAEKNFEIPGFFERYTDLVEKKIAKYDAEGKAKWGEVAEEDSWLLETANRVSKLMMLLNHHHHHLVEPEEEEKENDGGNGKGKGKDSLVNRVASIHQRVMSYLEEDFRFLMEECRIPIELDPGGNNNNNDTKGKQQQQQQVSSSEQEEVKKDQEGEIDESFPGYSEETIASLSKIAGEMLPGGYESECCQVYIISRRNAFEEVRKKLGLERISIDDMVLKVQWETLAANMIPAWINTLKQCAAVYFPGERRLAEAVFASSPSVSAGLFGSLSRGVVIQLLNFAEGAAMTKRAAEKLFKLLDMYESLREVIPKVNGLFPDESVEELKTEMNVAKSRLGEAAIFIFSDLENQIKLETAKSAVPGGAVHPLTRYIMNYLSVAGDYKETLEQVFKDHSKIERADSTSRPHSENDGVPEKQASSPFAGQVLRVMDLLDSSLEGKGRLYKDVALSNFFMMNNGRYILQKIKGSSEMSQVMGDTWIRKKSSELRTYHKNYQRETWNRVLQFLNPEGLNVNGKVHKPVLKERFKSFNALFDEIHRTQSSWVVKDEQLQSELRVSISGVVVPAYRAFIGRFAQIFDPGRQTEKYIKYQPEDIETYIDELFEGKPHQSIARRRT* | 714 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso16g0431 | 713 | Pfam | Exo70 exocyst complex subunit | 332 | 698 | IPR046364 | GO:0000145|GO:0005546|GO:0006887 | |
Gso16g0431 | 713 | MobiDBLite | consensus disorder prediction | 494 | 510 | - | - | |
Gso16g0431 | 713 | ProSiteProfiles | Protein kinase domain profile. | 356 | 713 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso16g0431 | 713 | MobiDBLite | consensus disorder prediction | 163 | 186 | - | - | |
Gso16g0431 | 713 | MobiDBLite | consensus disorder prediction | 1 | 80 | - | - | |
Gso16g0431 | 713 | MobiDBLite | consensus disorder prediction | 10 | 28 | - | - | |
Gso16g0431 | 713 | Gene3D | Exocyst complex component Exo70 | 171 | 710 | - | - | |
Gso16g0431 | 713 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 62 | 709 | IPR004140 | GO:0000145|GO:0006887 | |
Gso16g0431 | 713 | PANTHER | EXOCYST SUBUNIT EXO70 FAMILY PROTEIN | 62 | 709 | - | - | |
Gso16g0431 | 713 | SUPERFAMILY | Cullin repeat-like | 145 | 701 | IPR016159 | - | |
Gso16g0431 | 713 | MobiDBLite | consensus disorder prediction | 494 | 516 | - | - | |
Gso16g0431 | 713 | MobiDBLite | consensus disorder prediction | 221 | 243 | - | - | |
Gso16g0431 | 713 | MobiDBLite | consensus disorder prediction | 30 | 73 | - | - | |
Gso16g0431 | 713 | MobiDBLite | consensus disorder prediction | 219 | 262 | - | - | |
Gso16g0431 | 713 | MobiDBLite | consensus disorder prediction | 163 | 180 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso16g0431 | Gso-Chr16 | 5015018 | 5017585 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso16g0431 | 68 | 713 | EXO70 exocyst subunit family | AT5G13990 | 48.939 | 0.0 | 602 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso16g0431 | K07195 | - | gmx:100807802 | 1295.8 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso19g0842 | 19 | 34137021 | 34139587 | Gso16g0431 | 16 | 5015018 | 5017585 | GST | |
Gso16g0431 | 16 | 5015018 | 5017585 | Gso2g0541 | 2 | 5711796 | 5714289 | PCT | |
Gso2g0541 | 2 | 5711796 | 5714289 | Gso16g0431 | 16 | 5015018 | 5017585 | PCT |