Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0410 ATGGCTCTCCCCGACTCTTCTTCCCGCCGCAACTCCCTGATCCCCTCCTTCATCTACTCCTCTTCCTCCAAAACGCTCCCTCTACACCACATGCTCAACTCCGCCTCCGCCGCCGCCCCCTCCCAGCCGCCGGAAAACCTCCACGCCGGATCGCGCGGCCTCATGATTCCCTCTCCCAGCGAGTCACGCAAGATCGAGATGTACTCCCCTGCCTTCTACGCCGCCTGCACCGCCGGTGGAATCCTCAGCTGTGGCCTCACTCACATGGCCGTCACTCCTCTTGACCTAGTCAAGTGTAATATGCAGATTGATCCTGCTAAGTACAAGAGCATCTCTTCTGGGTTTGGAGTTTTGCTTAAGGAGCAGGGATTCAGGGGCTTTTTCCGTGGCTGGGTGCCTACCTTGCTTGGTTACAGTGCCCAGGGTGCTTGCAAATTTGGCTTCTATGAGTTCTTTAAGAAGTACTATTCTGATATTGCTGGCCCAGAGTATGCAAGCAAGTACAAGACCTTGATCTACCTTGCTGGTTCAGCATCTGCTGAGGTTATTGCTGATATTGCTCTTTGCCCATTTGAGGCTGTGAAGGTCCGTGTCCAAACTCAGCCAGGTTTTGCAAGGGGTTTGTCTGATGGGCTCCCAAAATTTGTCAGATCCGAAGGAACCTTAGGGCTGTACAAGGGATTAGTGCCTCTATGGGGACGACAGATTCCATACACAATGATGAAGTTTGCTTCGTTTGAGACCATTGTAGAGCTGATCTATAAGCACGCCATCCCAACACCAAAGAATGAGTGCACCAAAGGCCTGCAACTTGGTGTCAGTTTTGCTGGTGGATATATTGCTGGTGTACTTTGTGCAATTGTGTCTCATCCTGCTGATAATCTTGTCTCTTTTCTGAACAATGCAAAAGGAGCAACAGTTGGTGATGCGGTGAAGAAGCTTGGCCTGTGGGGTCTCTTTACCCGTGGTCTTCCCCTCCGTATTGTTATGATTGGAACTCTTACTGGAGCCCAATGGGGAATATATGATGCATTCAAAGTGTCTGTCGGATTGCCAACCACTGGTGGTCCTGCTCCTGCAGCTGCTCTAGCTTCTGATGCTGAGCTTGCAAAGGCATAG 1119 0.5112 MALPDSSSRRNSLIPSFIYSSSSKTLPLHHMLNSASAAAPSQPPENLHAGSRGLMIPSPSESRKIEMYSPAFYAACTAGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGFRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYASKYKTLIYLAGSASAEVIADIALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGTLGLYKGLVPLWGRQIPYTMMKFASFETIVELIYKHAIPTPKNECTKGLQLGVSFAGGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVSVGLPTTGGPAPAAALASDAELAKA* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0410 372 PANTHER MITOCHONDRIAL PHOSPHATE TRANSPORTER 6 365 - -
Gso16g0410 372 Gene3D Mitochondrial carrier domain 71 347 IPR023395 -
Gso16g0410 372 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 6 365 IPR044677 GO:0005315|GO:1990547
Gso16g0410 372 SUPERFAMILY Mitochondrial carrier 74 344 IPR023395 -
Gso16g0410 372 Pfam Mitochondrial carrier protein 74 157 IPR018108 -
Gso16g0410 372 Pfam Mitochondrial carrier protein 170 256 IPR018108 -
Gso16g0410 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 269 348 IPR018108 -
Gso16g0410 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 71 155 IPR018108 -
Gso16g0410 372 ProSiteProfiles Solute carrier (Solcar) repeat profile. 168 252 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0410 Gso-Chr16 4727401 4731011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0410 7 365 Chloroplast and Mitochondria Gene Families AT5G14040 79.404 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0410 K15102 - gmx:547633 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0871 19 34860983 34864806 Gso16g0410 16 4727401 4731011 GST
Gso16g0410 16 4727401 4731011 Gso16g1180 16 31014595 31018028 PCT
Gso16g0410 16 4727401 4731011 Gso19g0871 19 34860983 34864806 PCT
Gso16g1180 16 31014595 31018028 Gso16g0410 16 4727401 4731011 PCT
Gso19g0871 19 34860983 34864806 Gso16g0410 16 4727401 4731011 PCT