Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0395 ATGGTTGTGCAGTCTCTGGACGACGTTGTTCACCAGCAATTGATGGTTTCAGCCACGGCGGAGAAGAGTTCGGAATCCAAAATCGCCGTGACGGCAAATGGCGGGAACGGTGCTAAGTCCGCCGAGAAGAAACTGAGAGAATTATCGGAGGAGGGTTCGACAATGCCGCCGCGGAGGTCGAGTGCGAGGATTCAAGCGTTGCAGAAAGCGGAGGAGGAACTTCTTGCTCGTAAAAGAGCAGAGGGAGTTGAGGAAAAAGACAATTGCAACGATGAGGTGAAGGCTGGGAAGGCGAAGAAGCGCAATAGGAAAAGTAGTAGTGACGGTGAGGAGAGTGTAGTAGTGGAAGTAGAGGTTGTTTCGCCGCCGATGAAAAAACGGGTGGCCTACCGCAAGGGTAAGGTGGTGGACGGAGTGAATGGAAATGTTAAGGTAGGAGAAGTGAATGGGAAGGAGGGATTGGAAAATGCGGGTGGGGGTTTGGGTGAGAAGAGTGACTTGCTTAAGGTCAAAGAGACGATAAGACTGTTTAATAAGTATTACCTTCATTTAGTTCAGGAAGAAGAAAAGAGGTGTGGGAAGGCAGAGGCTGAGCGGAAAGCTGCTAAAAAGGCTTCAAAATCGAAGAAAGGTGCTCCACCTGAAGAATCAAAGACCACTGCTAAACGACCAGATCTAAAGGCTGTAAGCAAGATGATGGAAAATAATGAGATATTGTACCCTGAGAAAAGAATTGGCAACATTCCAGGTATTGATGTTGGATATCAGTTCTATTCTCGTGCTGAAATGGTTGCAGTTGGTTTTCATAGCCACTGGTTAAATGGCATTGATTATATGGGCCAGAGCTATGCCAAAGCGTACAGCTATGAACTTCCAGTTGCTGTTGCCATTGTTATTTCGGGCATGTATGAGGATGATCTGGATAATGCTGAGGATGTTGTGTACACTGGTCAAGGTGGGCATAATCTGACTGGTGATAAGCGTCAATTTCGGGATCAAAAGTTGGAGCGTGGTAACTTGGCTCTGAAGAATTGTTCTGAGCAATGTGTGCCTGTTAGAGTCATTCGTGGTCATGAATCTTCAAGCAGTTACACTGGTAAAGTATACACATACGATGGCTTGTACAAGGTTGTCAATTATTGGGCAGGGAAGGGAATATCCGGATTTACAGTCTACAAGTTTAGACTTAGGAGGCTTGAAGGGCAACCTACATTAACTACAAATCAGGTATATTTTACATATGGACGTGTACCTCAATCTCTAACAGAAATACAAGGGTTGGTTTGTGAAGATATCACTGGAGGTCAAGAAGATATGCCCATTCCGGCTACAAATTTGGTTGATGACCCCCCTGTTCCACCCACAGATTTCACATATTGTAAGTCACTCAAGGTTGCAAAAAATGTGAAGCTTCCCATGAATGCCACCGGATGCAAATGTGAAGGCATTTGTAATGACCCAACAACCTGTGCATGTGCATTGCGTAATGGCTCTGATTTTCCCTATGTATCTCGGGATGGTGGCAGGTTAATTGAAGCTAAAGATGTAGTATTTGAATGTGGTCCCAAATGTGGTTGTGGTCCTGGTTGTGTGAACCGAACGTCTCAAAGAGGACTTAGATATCGTCTGGAGGTTTTCCGTACTGCCAAAAAAGGATGGGCTGTTAGATCCTGGGATTTTATACCTTCTGGAGCACCAGTTTGTGAGTACACCGGAATACTTGCTAGGGCCGAGGATATGGATAGCGTTCTAGAAAACAATTATATTTTTGAGATAGATTGCTTGCAAACTATAAAGGGGCTCGGGGGAAGAGAGCGACGATCACAAGATGGAGATATTCCTGCAAATCTTTTGGACAAATATCATGATCAATGTTCTGAAAGTGTGCCAGAGTTTTGTATTGATGCAGGATCTACTGGAAATATTGCTAGGTTTATAAACCATTGTTGTGAGCCTAATCTGTTTGTTCAATGTGTTTTGAGCACACACGATGATTTGAGATTGGCTCGTATAATGTTGTTTGCTGCAGACAACATACCCCCTTTGCAGGAATTAACATATGACTATGGTTACGTGCTTGATAGCGTGTTGGACTCGGATGGGAAGATTAAGCAAATGCCATGCTACTGTGGAGCCTCAGTCTGCAGGAAGCGATTATTCTAA 2163 0.4448 MVVQSLDDVVHQQLMVSATAEKSSESKIAVTANGGNGAKSAEKKLRELSEEGSTMPPRRSSARIQALQKAEEELLARKRAEGVEEKDNCNDEVKAGKAKKRNRKSSSDGEESVVVEVEVVSPPMKKRVAYRKGKVVDGVNGNVKVGEVNGKEGLENAGGGLGEKSDLLKVKETIRLFNKYYLHLVQEEEKRCGKAEAERKAAKKASKSKKGAPPEESKTTAKRPDLKAVSKMMENNEILYPEKRIGNIPGIDVGYQFYSRAEMVAVGFHSHWLNGIDYMGQSYAKAYSYELPVAVAIVISGMYEDDLDNAEDVVYTGQGGHNLTGDKRQFRDQKLERGNLALKNCSEQCVPVRVIRGHESSSSYTGKVYTYDGLYKVVNYWAGKGISGFTVYKFRLRRLEGQPTLTTNQVYFTYGRVPQSLTEIQGLVCEDITGGQEDMPIPATNLVDDPPVPPTDFTYCKSLKVAKNVKLPMNATGCKCEGICNDPTTCACALRNGSDFPYVSRDGGRLIEAKDVVFECGPKCGCGPGCVNRTSQRGLRYRLEVFRTAKKGWAVRSWDFIPSGAPVCEYTGILARAEDMDSVLENNYIFEIDCLQTIKGLGGRERRSQDGDIPANLLDKYHDQCSESVPEFCIDAGSTGNIARFINHCCEPNLFVQCVLSTHDDLRLARIMLFAADNIPPLQELTYDYGYVLDSVLDSDGKIKQMPCYCGASVCRKRLF* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0395 720 MobiDBLite consensus disorder prediction 18 33 - -
Gso16g0395 720 Pfam SET domain 552 690 IPR001214 GO:0005515
Gso16g0395 720 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 58 720 IPR025794 GO:0016571
Gso16g0395 720 SMART G9a_1 241 402 IPR003105 -
Gso16g0395 720 ProSiteProfiles YDG domain profile. 246 398 IPR003105 -
Gso16g0395 720 Gene3D SET domain 422 720 IPR046341 -
Gso16g0395 720 ProSiteProfiles Pre-SET domain profile. 476 538 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gso16g0395 720 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 58 719 - -
Gso16g0395 720 Coils Coil 185 205 - -
Gso16g0395 720 MobiDBLite consensus disorder prediction 70 111 - -
Gso16g0395 720 Gene3D - 228 414 IPR036987 -
Gso16g0395 720 SUPERFAMILY SET domain 427 696 IPR046341 -
Gso16g0395 720 MobiDBLite consensus disorder prediction 18 113 - -
Gso16g0395 720 SUPERFAMILY PUA domain-like 228 418 IPR015947 -
Gso16g0395 720 SMART PostSET_3 704 720 IPR003616 -
Gso16g0395 720 ProSiteProfiles SET domain profile. 541 690 IPR001214 GO:0005515
Gso16g0395 720 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 58 719 - -
Gso16g0395 720 Pfam SAD/SRA domain 245 402 IPR003105 -
Gso16g0395 720 ProSiteProfiles Post-SET domain profile. 704 720 IPR003616 -
Gso16g0395 720 SMART set_7 541 696 IPR001214 GO:0005515
Gso16g0395 720 SMART preset_2 429 525 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gso16g0395 720 Pfam Pre-SET motif 433 533 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Gso16g0395 720 MobiDBLite consensus disorder prediction 196 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0395 Gso-Chr16 4488643 4504932 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0395 232 720 EF-hand Containing Proteins AT5G13960 67.413 0.0 704
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gso16g0395 SAD_SRA 1.7e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0395 K11420 - gmx:100795584 1325.46