Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0389 ATGTCAAGTACTCTTGCAGCAATATTTGGAGGAGCTGCAGGAGCCGTGGCATTGGTAGGGATTGCTATAATACTTATATGGTTTTGTTTGTCTCGCCAAAGGAATGTTTCTAGGACTTCAGAGACAGGGTCCTCTGATCCTTCCCAAGTAGGAAGGCATGGTGCAATGGAGTTGCCTATACGAGATACTAGGCGGTTTGAGATGGAAGAACTATCTCTGGCCACAAAAAATTTCAGTGACAAGAATTTGATTGGAGAAGGGAAATTTGGAGAGGTATACAAGGGTTTACTGCAAGATGGGATGCTTGTAGCTATCAAAAAACGCCGTGGACTTGCTAGTCAAGAATTTGTTGATGAGGTACGCTATCTCTCATCTATTCACCACCGAAATCTTGTCAGTCTTTTAGGCTACTGCCAGGAGAACAATCTGCAGTTTCTTATATATGAATATGTGCCTAATGGAAGCGTCTCCAGTCACTTGTATGGCGCTGGTCAACAACCGCGAGAGAAGCTAGAATTCAAGCATAGACTTCCAATAGCTCAAGGTGCAGCTAAAGGTTTGGCTCATCTTCACTCTTTGAGTCCCCGTTTGGTGCATAAGAATTTCAAAACAGCTAATGTTCTTGTGGATGAAAACTTCATTGCTAAGGTGGCAGATGCTGGACTTCGCAATTTTTTGGGGAGAGTTGACATTGCAGGCTCCTCTTCTCAAGTGGCAACAGATGAAATATTTCTTGCATCAGAGGTGAGAGAGTTCAGACGATTTTCTGAAAAGAGCGATGTATACAGCTTTGGGGTGTTTTTGCTGGAGTTGTTAAGTGGGAAACAAGCAACAGAATCACCATTTCCGGACTCTAATCAAAATCTGGTTGAATGGGTGCTAAGTAATCAAGACCGTGGCATGATGTCTTACATCATTGATAGAAGATTGGAGAGTAGTTTTACAGCTGAGGGAATGGAAGAGTACATCATGCTCATAATTAGATGCTTAGATCCTTCAAGTGAGAGGCGACCTGCCATGAGCTATGTGGAAATGGAACTTGTTCGGATCCTAGACAAGGAAATGAACTTGACAACAATCATGGGAGAAGGAACCCCTACTGTGACTCTTGGAAGTCAATTATTCAAATCAACAAAATAA 1140 0.4254 MSSTLAAIFGGAAGAVALVGIAIILIWFCLSRQRNVSRTSETGSSDPSQVGRHGAMELPIRDTRRFEMEELSLATKNFSDKNLIGEGKFGEVYKGLLQDGMLVAIKKRRGLASQEFVDEVRYLSSIHHRNLVSLLGYCQENNLQFLIYEYVPNGSVSSHLYGAGQQPREKLEFKHRLPIAQGAAKGLAHLHSLSPRLVHKNFKTANVLVDENFIAKVADAGLRNFLGRVDIAGSSSQVATDEIFLASEVREFRRFSEKSDVYSFGVFLLELLSGKQATESPFPDSNQNLVEWVLSNQDRGMMSYIIDRRLESSFTAEGMEEYIMLIIRCLDPSSERRPAMSYVEMELVRILDKEMNLTTIMGEGTPTVTLGSQLFKSTK* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0389 379 Gene3D Transferase(Phosphotransferase) domain 1 151 364 - -
Gso16g0389 379 SUPERFAMILY Protein kinase-like (PK-like) 63 345 IPR011009 -
Gso16g0389 379 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 1 379 - -
Gso16g0389 379 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Gso16g0389 379 ProSiteProfiles Protein kinase domain profile. 78 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0389 379 Pfam Protein tyrosine and serine/threonine kinase 82 346 IPR001245 GO:0004672|GO:0006468
Gso16g0389 379 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 379 - -
Gso16g0389 379 Gene3D Phosphorylase Kinase; domain 1 43 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0389 Gso-Chr16 4417875 4422465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0389 64 351 Receptor kinase-like Gene Family AT1G30570 40.476 1.49e-62 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Gso16g0389 PK_Tyr_Ser-Thr 7.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0389 - - gmx:100305436 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0900 19 35414687 35419327 Gso16g0389 16 4417875 4422465 GST