Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0380 ATGGAACCGGAATCCGGAACTTCGACTTCTCGGAATCCTTCTCAGTTGTCTTGGGTGAATCTGTCTAGGAATTTATTATTAGCGTATCAAAGCTTTGGTGTGGTGTATGGAGATCTGAGCACTTCTCCTCTCTATGTCTTCACAAGCACCTTCAAGGGGAAGTTGCAGAATCACCATGACGAGGAAACTATATTCGGCACGTTTTCGTTGATTTTTTGGACCCTTACTTTGATTCCGTTGCTTAAGTATGTATTCATCCTATTGAGTGCTGATGACAACGGGGAAGGTGGAACATTCGCTCTTTATTCGCTGCTCTGTAGGCATGCCAAGTTTAATTTGCTCCCCAATCAACAAGCAGCTGATGAGGAGTTATCATCCTATAAATATGGTCCCTCTTCACAGGCTATAGCCTCTTCTCCTCTAAAGAGGTTTCTGGAGAAACATAAAAGGTTAAGAACAGCCCTGCTTGTTGTGGTATTGTTTGGTGCTTGCATGGTCATTGGTGATGGTGTGCTTACTCCAGCAATTTCGGTTCTAGCATCAGTCTCAGGACTAAAAGTTACAGAAAAAAAATTAACAGATGGTGAACTTGTCCTGCTTGCCTGTGTCATATTGGTTGGACTGTTTGCTCTCCAACATTGTGGCACACACAAAGTTGCAGTTATGTTTGCACCAATTGTAATAATCTGGCTTGTATCAATATTTTCTATTGGGGTGTATAATACAATTCATTGGAATCCAAAAATAGTCCGTGCTATATCGCCATATTATATCATCAAGTTTTTTAGCAGGACTGGTAAAGAAGGTTGGGTTTCTCTTGGAGGGATACTTCTTTGTATCACTGGAACTGAAGCTATGTTTGCGGATCTTGGTCATTTCACTGCTTCGTCAATAAGGCTTGCATTTGCGTTTGTTATATACCCGTGTTTGGTGGTACAGTATATGGGTCAAGCTGCTTTCTTGTCTAAAAATCTCGACTCTGTTGATAACGGTTTTTATGACTCAATACCTGACCCTGTGTTTTGGCCTGTTTTCATAATCGCCACCCTTGCTGCAATTGTTGGGAGTCAAGCTGTTATAACTGCAACTTTCTCCATCATCAAGCAGTGTCATGCGCTTGGTTGCTTTCCGCGAGTCAAAGTTGTACACACCTCAAAACATATATATGGACAGATCTATATCCCAGAAATCAATTGGATACTTATGATCCTAACTCTTGCAATAACCATTGGATTTCAGGACACGACCATAATTGGAAATGCTTATGGGTTGGCTTGTATGACAGTTATGTTCATAACTACATTTCTGATGACACTAGTCGCAATCTTTGTCTGGCAGAAAAGTGTCTTGATTGCTGTAGTATTTCTTTTATTCTTTTGGGTGATAGAGGGCGTATATCTATCAGCAGCTTTCATCAAAGTGCCTCAGGGAGGATGGGTACCTCTAGTCTTATCATTCATCTTCATGATTGTTATGTACGTGTGGCATTATGGAACTCGTAGGAAGTACAGCTATGATCTGCACAACAAAGTTTCATTGAAATGGTTACTGGGCTTGGGCCCAAGCCTTGGCATTGTTCGTGTACCTGGGATTGGTCTCATCTACACTGAACTGGCAACAGGCATACCTGCAATATTTTCCCATTTTGTAACAAATCTTCCTGCATTTCACCAGGTGTTGGTTTTTGTTTGTGTAAAATCAGTTCCTGTTCCATATGTTTCACCGGAAGAACGTTTCCTTATTGGGCGAGTTTGCCCCAGACCATACCGAATGTATAGGTGCATTGTCAGATATGGTTACAAGGACATTCAAAGGGATGATGGAGATTTTGAGAATCATCTTATACAGAGTATAGCAGAATTTATCCAAATGGAAGCAGTGCAACCTCAGTTCTCAAGTTCCGAAGCTTCTTCTTCACTTGATGGGAGGATGGCCGTTATAAGTTCTAGAAACTATGATTATGCTTCAAGTTTAATAGTTTCTGAGCAGGAGGATATAGGCGTTGACATATCCATCCCTAGCAGCAGATCTGCAACCCTGCAAAGTTTGCAATCGGTTTACGATGATGAAACTCCGCAAGTTAGAAGACGACGAGTAAGATTTCAGCTACCAGAAAACACTGGTATGGATCCCGATGTTAGGGAAGAGCTTTTGGATTTAATTCAAGCCAAGGAAGCTGGGGTTGCATATATAATGGGGCACTCATATGTGAAGGCAAGGAAATCATCCTCATTCTTGAAAAAGCTCGTGATTGATATTGGTTACTCATTTCTGCGCAAGAATTGCAGGGGTCCAGCTGTAGCTCTTAACATTCCTCACATTAGTCTTATTGAAGTTGGGATGATATATTATGTGTAG 2358 0.4126 MEPESGTSTSRNPSQLSWVNLSRNLLLAYQSFGVVYGDLSTSPLYVFTSTFKGKLQNHHDEETIFGTFSLIFWTLTLIPLLKYVFILLSADDNGEGGTFALYSLLCRHAKFNLLPNQQAADEELSSYKYGPSSQAIASSPLKRFLEKHKRLRTALLVVVLFGACMVIGDGVLTPAISVLASVSGLKVTEKKLTDGELVLLACVILVGLFALQHCGTHKVAVMFAPIVIIWLVSIFSIGVYNTIHWNPKIVRAISPYYIIKFFSRTGKEGWVSLGGILLCITGTEAMFADLGHFTASSIRLAFAFVIYPCLVVQYMGQAAFLSKNLDSVDNGFYDSIPDPVFWPVFIIATLAAIVGSQAVITATFSIIKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMILTLAITIGFQDTTIIGNAYGLACMTVMFITTFLMTLVAIFVWQKSVLIAVVFLLFFWVIEGVYLSAAFIKVPQGGWVPLVLSFIFMIVMYVWHYGTRRKYSYDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYTELATGIPAIFSHFVTNLPAFHQVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENHLIQSIAEFIQMEAVQPQFSSSEASSSLDGRMAVISSRNYDYASSLIVSEQEDIGVDISIPSSRSATLQSLQSVYDDETPQVRRRRVRFQLPENTGMDPDVREELLDLIQAKEAGVAYIMGHSYVKARKSSSFLKKLVIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV* 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0380 785 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 20 785 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gso16g0380 785 TIGRFAM kup: potassium uptake protein 27 785 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gso16g0380 785 Pfam K+ potassium transporter 29 602 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gso16g0380 785 PANTHER POTASSIUM TRANSPORTER 4 20 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0380 Gso-Chr16 4311586 4316409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0380 1 785 Inorganic Solute Cotransporters AT3G02050 79.494 0.0 1252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0380 K03549 - gmx:100790329 1553.11