Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0357 ATGACCAAGAACAACATGAATTTTCTAACCTTCGTTACTGTTCTACTCTTCATACTACCAGCAACCTCATCTTCCCAGTATTTGGGGAACAACCTTCTCACTCATCGCAAGATATTCCTAAAAAAAGACAACATTATTACCTCGTACGCTGTCATCTTTGACGGTGGTAGCACAGGAACCCGTGTGCATGTCTTCCATTTTGACCAGAATTTGGATCTCCTTCCCATTGGTGATAGTCTTGAGCTTAATAAAAAGATCACACCCGGTTTAAGTGCTTACGAGGATGATCCCGAGCAAGCTGCAGAATCTCTGATTCCACTTTTGGAGGAAGCAGAAAGTGTAGTTCCTGAGGACTTGCGTCCCAACACACCCGTTAGGCTAGGGGCAACTGCAGGCTTAAGGCTTTTGAAAGGGAATGCTTCTGAACAAATATTGCAAGCGGTTAGGGATATGCTGAGTAACAGAAGTACCCTGAACCTACAATCTGATGCAGTAACTATTCTTGATGGAAACCAAGAAGCTGCTTATATGTGGGTGGCATTGAACTATCTATTGGGCAATTTGGGAAAAGTGATTTCAAAGACGGTGGGAGTAGCTGATCTTGGAGGTGGATCAGTTCAAATGGCATATGCAGTCTCAAAGAATACAGCTAAAAATGCACCACAACCACCAGAAGGAGAAGAATCATACATAAAGACTCTTGTACTTAATGGAAAAACTTATGACCTCTATGTTCACAGTTACTTGCACTTTGGTAAAGAAGCATCTCGTGCGGAGATGTTGAAGGTCACTGGTGATTCAGCTAACCCTTGCATTTTAGCCGGTTATAATGGGACCTACACATATTCGGGAGTTAAATATAAGGCCTTGGCCTCCACTTCTGGGTCCAATTTCGATAAATGTCGAGAGGTAGCTCTTAAAGCTCTGAAAGTGAATGAACCATGCCCTCATCAGAATTGCACTTTTGGCGGGATATGGAACGGTGGAGGGGGGAGTGGACAAAAAGTCCTTTATGTTACTACATCTTTCTATTATCTGGTTATACAGGCTGGTATAGCCGATGCAAGTAAAACCAGTTCCAAAGTTTATCCTGCGGAATTCAAGGCCGCAGCTAAGCGAGCGTGTCAAGTCAAATTTGAGGATGCTCAATCCACTTATCCACTTATGATGGAGGATGCACTTCCATACATTTGCATGGATATTACGTATCAGTATACGTTGCTCGTCGATGGATTTGGCCTGGATCCTTGGAAAGAGATTATAGTAGCAAATGAAATTGAATACCAAGGTGCTCTTGTGGAAGGAGCATGGCCTCTAGGCAGTGCCATAGAAGCCATATCTTCATTGCCCAAATTTAATAAATTGATGTATTTTATATAA 1380 0.4254 MTKNNMNFLTFVTVLLFILPATSSSQYLGNNLLTHRKIFLKKDNIITSYAVIFDGGSTGTRVHVFHFDQNLDLLPIGDSLELNKKITPGLSAYEDDPEQAAESLIPLLEEAESVVPEDLRPNTPVRLGATAGLRLLKGNASEQILQAVRDMLSNRSTLNLQSDAVTILDGNQEAAYMWVALNYLLGNLGKVISKTVGVADLGGGSVQMAYAVSKNTAKNAPQPPEGEESYIKTLVLNGKTYDLYVHSYLHFGKEASRAEMLKVTGDSANPCILAGYNGTYTYSGVKYKALASTSGSNFDKCREVALKALKVNEPCPHQNCTFGGIWNGGGGSGQKVLYVTTSFYYLVIQAGIADASKTSSKVYPAEFKAAAKRACQVKFEDAQSTYPLMMEDALPYICMDITYQYTLLVDGFGLDPWKEIIVANEIEYQGALVEGAWPLGSAIEAISSLPKFNKLMYFI* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0357 459 Pfam GDA1/CD39 (nucleoside phosphatase) family 47 451 IPR000407 GO:0016787
Gso16g0357 459 Gene3D - 49 443 - -
Gso16g0357 459 PANTHER NOD FACTOR-BINDING LECTIN-NUCLEOTIDE PHOSPHOHYDROLASE 6 459 - -
Gso16g0357 459 Gene3D Exopolyphosphatase. Domain 2 169 427 - -
Gso16g0357 459 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 6 459 IPR000407 GO:0016787
Gso16g0357 459 CDD NBD_sugar-kinase_HSP70_actin 51 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0357 Gso-Chr16 4024279 4029599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0357 48 448 Calmodulin-binding Proteins AT3G04080 56.965 1.61e-160 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0357 K14641 - gmx:100784833 901.738