Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0356 ATGGTACTTGTGCTATGGTCAAGAGGGACTAAGAACATGGACTTCCTAACCCTCTTCACTCTTCTACTCTTGTTATTCATTCATACAGCACTCTCTTCTACCCAATATCATGATGGGAACATCTTACTCACTCATCGTAAGATCTTCCCCAAACAGGAAGCTATCACCTCGTACGCTGTCATCTTTGATGCTGGTAGCACTGGTAGCCGTGTGCATGTCTTCCATTTCGACCAGAACTTGGATCTCCTTCGTATTGGCAACGAACTCGAGTTTTATGATAAGGTAACACCCGGTTTGAGTGCATACGCAGATAATCCTCAACAAGCTGCAGAATCTCTTATCCCACTTTTAGAGGAAGCTGAAAGTGTTGTCCCTGAGGACCTGTACCCTACTACACCCGTTAAGCTTGGGGCGACTGCAGGTTTAAGGCTTTTGGAAGGGGATGCTTCTGAAAGGATATTGCAAGCGGTTAGGGATTTGCTCAAGAACAGAAGTACCCTGAACACTCAACCAGATGCAGTAGCTATTATTGATGGAACCCAAGAAGGTTCTTATCTATGGGTGACAATTAATTATTTATTGGGGAAGTTGGGAAAAAGGTTTTCAAAGACAGTAGGAGTAGTTGATCTTGGAGGTGGATCAGTTCAAATGGCATATGCCATCTCAAGGAACACAGCAAAAAATGCTCCAAAACCACCAGATGGAGAGGAACCTTACATAAAGAAGCTTGTACTCAAGGGAAAGGAATATGACCTCTATGTTCACAGTTATTTGCATTACGGTAGAGAAGCATCTCGTGCCGAGATTTTGAAGGTCACTGATGGCTCCGCTAACCCTTGTATTTTAGCTGGCTTCGATGGGACCTACACATATTCAGGAGCAGACTATAAGGCCTTCGCTCCCATTTCTGGCTCCAGCTACGATGAATGTAGAGAGGTTGTTCTTCAAGCTCTCAAATTGAATGAGTCATGCCCCCATCAAAATTGCACATTTGGTGGTATATGGGATGGTGGAAGGGGAAGTGGACAGAAAATTCTTTTCGGCACTTCATCTTTCTATTATCTGCCTACAGAGATTGGTATCATTGATCTAAATAAACCCAACTCCAAAATTCATCCTGTTGATCTTGAGATTGAAGCTAAACGAGCTTGTGAAACAAAATTGGAGGATGCCAAGTCCACCTATCCAAACCTTGCTGAGGATAGACTTCCATATGTATGCTTGGATATTGCATACCAGTATGCATTGTACACCGATGGATTTGGCCTTGATCCATGGCAAGAGATTACAGTGGCAAATGAAATAGAATATCAGGATGCTCTTGTGGAAGCTGCATGGCCTTTAGGCACTGCCATAGAAGCCATATCGTCATTGCCTAAATTTGATCGATTAATGTATTTTATTTAA 1407 0.4286 MVLVLWSRGTKNMDFLTLFTLLLLLFIHTALSSTQYHDGNILLTHRKIFPKQEAITSYAVIFDAGSTGSRVHVFHFDQNLDLLRIGNELEFYDKVTPGLSAYADNPQQAAESLIPLLEEAESVVPEDLYPTTPVKLGATAGLRLLEGDASERILQAVRDLLKNRSTLNTQPDAVAIIDGTQEGSYLWVTINYLLGKLGKRFSKTVGVVDLGGGSVQMAYAISRNTAKNAPKPPDGEEPYIKKLVLKGKEYDLYVHSYLHYGREASRAEILKVTDGSANPCILAGFDGTYTYSGADYKAFAPISGSSYDECREVVLQALKLNESCPHQNCTFGGIWDGGRGSGQKILFGTSSFYYLPTEIGIIDLNKPNSKIHPVDLEIEAKRACETKLEDAKSTYPNLAEDRLPYVCLDIAYQYALYTDGFGLDPWQEITVANEIEYQDALVEAAWPLGTAIEAISSLPKFDRLMYFI* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0356 468 Gene3D Exopolyphosphatase. Domain 2 178 436 - -
Gso16g0356 468 Pfam GDA1/CD39 (nucleoside phosphatase) family 56 459 IPR000407 GO:0016787
Gso16g0356 468 CDD NBD_sugar-kinase_HSP70_actin 60 219 - -
Gso16g0356 468 Gene3D - 58 452 - -
Gso16g0356 468 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 177 192 IPR000407 GO:0016787
Gso16g0356 468 PANTHER NOD FACTOR-BINDING LECTIN-NUCLEOTIDE PHOSPHOHYDROLASE 14 468 - -
Gso16g0356 468 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 14 468 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0356 Gso-Chr16 4008232 4014713 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0356 57 457 Calmodulin-binding Proteins AT3G04080 59.204 3.19e-166 475