Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0323 ATGAATTCCTCCGACTTTGGAACCAACGATTTCATTTTGATAAACTCAAACAACTCGCTGCATGTCTGTTTCAATAGTAGCACATACCATGGTTCGAGCCTTTGGTTGGAAAATTCCGTGGAGAAAACACTACCCGAATTTGTCCTGCAATTTGCAATTATCCTAGCAGTCAACCGATTTTTGCTCCTTGTTTCTGAACAATGCCATGTACCTCATATTGTTGCCAATATTTTTACGGGTTTTCTATTTGGTCCATCTGTTCTGGGACGTTGGAATGCTTTTATCAAAAACGCATTTCCTTTCAGTAACATGATACCATTTGAAACCGTGGGAGGGATGGTCCTTGTTTACTACGTGTTCTTTGTAGGTCTAGAGATAGACTTGAAACCAATAACGGGATTTCACAAGAAGGCCATGGTTATTGTCATTTCCTGCACAATCTTCACCTTACCAATAGGGTTTGGCTTGTACTACATGCTTGTCACCGACATGTGGCGCAAACCTTTGCCCCTTGTCAATGCTAGGCCAAAGGGTGCAATATTATGGGGAATTACCCTTTCTTGCAGCAGTGAGTTTCCTGAGATTGCAAAGATCCTTTCAGACCTTAAGCTTCTCCTCACAGAAAACGGACAACTGACTCTCACTGCTTCTCTCATCAATGACTTGTTTTCATGGACTCTTCTTGTGTTAGCTCTATCTAATTTCTATTATGCTTCTGGGATATCTTTTTTCATAACGATCATGCTTGTGTTGGTGTGTTTTGTGGTACTTCACCCCTTTTTCAAGTGGCTATTCAACAATGCGGGTACCCGGGATCGTGAGTTCCTTGAGTCACAAGTTATCTTTGTGTTGCATATAGTTTTGGTTATTGGGTTGTTAACTGATGGGTTGGGTATGCATTCCATTATTGGGGCTTTCTTTTTGGGTGTTGTGATCCCTCAAGGTGCGCTTAACAACGCGGTGCAGGACAAGGCACATGATTTTGTGGCTTCGTTCATGATGCCTTTGTTCTTTGTGACTGTTGGAGAGAGAATTAGGATCCAAGACTTGGCCTTGGACACTCATTTTACAACTATGGTGGTGGTTGTTTTGTTGGCTTTTGTGGCGAAAATTGTGTGCACTATGGCGGTTTCTTGGTTCTGCCTGATGCCAAACATGGAAGGATTATCCCTTGCACTGATCATGAATACTAAAGGAATAATGCCATTGATCGTTCTCAGCATCGGCAGGGACAGACGCGAACTGGACAACCAAACCTATGGGGTGATGCTAGTAGCATGCTGGCTAATGACAATCCTAGTGGGACCAGTCTCATTCGCTTTAACAAAAGCCTTGAAAACAAGAAACATTCTAGGAGGCAACCGCAGGAGCATGCAAAACACACAACCAGACTCACCCCTTAGACTACTAGCTTGCATCCACACAAAGCGCGATGCCAACGTGATTATTGACCTATTAAAAGCCTCGTGCCCCTCGGTGAGAACCCCAATTCAAGTCCTGGCAGTGGAACTAAACAAAATGAACACCCGCCCCACCGCATCACTCATCATAAGGGATGCCAAAAAACCATCCTTCACCTCAAAATCCCCGAAACTCGACACCGAAGATACCCTCAACAGCTTCGACAACCTCAACCAAGCCATCTTCACGGAGAAGATGAGAATAATCTCAGACTACAACTCCATGCACAAAGACATCTTAAACCTTGCAAGGCGTAGAGGAGTGGCGCTTATACTAACCACACTATACAAGCAACCAACTTACGACGGTTTGGGAGCCGGTGCCGCCACCGCAAGAGCAGTTAACATAATTAACCGCGACCAAGCAAGCAAAGACGAGAAGAAAGTGGTGTTGGAGAACCTAGTTAGGGATGCACCATGCTGTGTGGCGATATTTGTGGATAGGGGGTTGAGTGGTCATAATAAGGAGCAACATGTGGCGATGTTCTACATCTCTGGTGCAGATGACCGAGAAGCGCTCTCATACGCGTGGAGAATGAGTAGAAGGCAGGAGGTGAAGTTAACGGTGGTGAGGCTGGTTTGGGAGAACCCTAATGACGAGTTCGACGAGAAGGACAAGGAGTTCATAAGGGGGTTTGTGGGGCAAACGAGGGAGATGGGTAGGGTTAGGTATTTGGAGAAGAAGGTGAGGGATGAGAAGGAGACGGTGAAGGTGCTGGATAAGATAGGGAATAAAGGGTTTGATTTGTATGTGGTGGGGAGAGGGCATGGGAGGAAGATGTCGCTGGCGCAGACGCTGGATCCGGTGTTGGAGGAGCCTGCGTTGGGGCCTCTTGGCGATGCTTTGACCGATTTGAACTCTGCGGCTCAAACATCTATTTTGATTTTCCAGAGACAGGCTCCGCTTGTTCATGGGAACCATGTCAGGTCTGCTTCGTCTGTTGCTTATGACAAAGTGTTTGATGCCATGGTGGAGCAGCAACTACTATGCCATTCAACCAAGTTTCCAATGCTTTTAAGTCATTATGCTTGA 2493 0.4577 MNSSDFGTNDFILINSNNSLHVCFNSSTYHGSSLWLENSVEKTLPEFVLQFAIILAVNRFLLLVSEQCHVPHIVANIFTGFLFGPSVLGRWNAFIKNAFPFSNMIPFETVGGMVLVYYVFFVGLEIDLKPITGFHKKAMVIVISCTIFTLPIGFGLYYMLVTDMWRKPLPLVNARPKGAILWGITLSCSSEFPEIAKILSDLKLLLTENGQLTLTASLINDLFSWTLLVLALSNFYYASGISFFITIMLVLVCFVVLHPFFKWLFNNAGTRDREFLESQVIFVLHIVLVIGLLTDGLGMHSIIGAFFLGVVIPQGALNNAVQDKAHDFVASFMMPLFFVTVGERIRIQDLALDTHFTTMVVVVLLAFVAKIVCTMAVSWFCLMPNMEGLSLALIMNTKGIMPLIVLSIGRDRRELDNQTYGVMLVACWLMTILVGPVSFALTKALKTRNILGGNRRSMQNTQPDSPLRLLACIHTKRDANVIIDLLKASCPSVRTPIQVLAVELNKMNTRPTASLIIRDAKKPSFTSKSPKLDTEDTLNSFDNLNQAIFTEKMRIISDYNSMHKDILNLARRRGVALILTTLYKQPTYDGLGAGAATARAVNIINRDQASKDEKKVVLENLVRDAPCCVAIFVDRGLSGHNKEQHVAMFYISGADDREALSYAWRMSRRQEVKLTVVRLVWENPNDEFDEKDKEFIRGFVGQTREMGRVRYLEKKVRDEKETVKVLDKIGNKGFDLYVVGRGHGRKMSLAQTLDPVLEEPALGPLGDALTDLNSAAQTSILIFQRQAPLVHGNHVRSASSVAYDKVFDAMVEQQLLCHSTKFPMLLSHYA* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0323 830 Pfam Sodium/hydrogen exchanger family 54 439 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso16g0323 830 PANTHER CATION/H + ANTIPORTER 18 793 - -
Gso16g0323 830 PANTHER CATION/H+ EXCHANGER 3 18 793 - -
Gso16g0323 830 Gene3D - 45 449 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0323 Gso-Chr16 3671033 3674756 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0323 16 785 Antiporter Super Family AT2G13620 31.734 2.19e-127 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0323 - - gmx:100780176 1642.48