Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0322 ATGGTGAGCGTTGAATCTCGTTACACCGTCTTACCCTCTAAACCCACCCCAAATGGAAAACTCTTCTCCTTGATCGAACAAATTAAGCTTCGCACTCACGCGCCACTCCTGTACGTGTACAAGCCACACCCCGATCACGATGCATCAACCTTTGTTAACACCTTGAGGCACTCTCTTAGCCAAGCTTTGACCATCTATTACCCTCTTGCGGGTAGGTTGAGTTCGATCGAAGGTGGAAAATGGGAGCTTCATTGCAATGCCAAGGGAGCACAACTCTTGGAAGCCAATTGCAAAGATTTAAACTTGGATGATTTGGGTGATTTTGTGCCTACCCATTTGGTGTCACAACTCATACCCAACATTGACTACAATGTCCTAGTTGAGGACATACCTTTGTTGGTTGTGCAACTAACGAGGTTCCCTTGTGGCGGTGTTACCATTGGGGTGGCCTTGTGTCGTTGCGCAATCGACGGAACCGCGTCCATGCGGTTCATGACCACGTGGGCCAAGTTGGCTAGGAAGGAAAATTTGGACCACGTGGAAATGATGCCGTGCTGTGATCGAAATAAGTTGAATTCGTACAAGGTTGATGATTCGAGGTCCCACGACCATTCGGAGTTTCGCACTCCTCCGAATTGGTTAGGTTCATTAGGAGGCAGAGACACTAATGTTGTGGTTGCAATAGTGAAGCTCACAGATGCACAAGTGAAGAAGCTCAAGCACAAGGTAAATTACGTTAACATAATTAACACTACTAGAGCTAGTAGTACTTCACGACCTTATTCAACTTTTGAGGTTGTTGCTGGGTATTTGTGGAAGTGTGTGAGTAAAGCACGTTATGAGGGGAAAAGTGACCAACCTACGAGGTTGTCTACTTTGGTTAATTGTAGGAACCGAATAACTCCACCACTTCCTAATGGGTATGCGGGAAATGCAGCATTTCCCACCGTGACACCCACATGCTCCTTTGGTGAAATCATGCAAAAACCTTTGGGTTATGCAATTGGGAACGTTAGGGTGGCACTTGAAAGGGTGACAAGGGAGTTTGTGGGGTCAGCACTTGATCACATAGCAAAGGAGAAAGACATGAATTTGGTGAGGTACAATTTTCACTACCCAACCTCAAGTGTGCATAAGGGACCTTACAAGGGGAATCCGAACCTTTTTGTTGTTAGTTGGATGAATTTTTCGTATAAGGATGCGGATTTTGGATTTGGGAAGCCTTTGTATTTTGGCCCTGGGTTCATGGATGCTGAAGGGAAGGCATTTGTTATGAATAAGGCTAATGGGGATGGCCTCATTGTGGCAATTTCTTTGGAGGCATCTCACATGGATGCTTTCAAGAAATTCTTTTACGGTGACATCCAAGAGGAGGAATTTCCTATTTCCAAACTGTGA 1398 0.4542 MVSVESRYTVLPSKPTPNGKLFSLIEQIKLRTHAPLLYVYKPHPDHDASTFVNTLRHSLSQALTIYYPLAGRLSSIEGGKWELHCNAKGAQLLEANCKDLNLDDLGDFVPTHLVSQLIPNIDYNVLVEDIPLLVVQLTRFPCGGVTIGVALCRCAIDGTASMRFMTTWAKLARKENLDHVEMMPCCDRNKLNSYKVDDSRSHDHSEFRTPPNWLGSLGGRDTNVVVAIVKLTDAQVKKLKHKVNYVNIINTTRASSTSRPYSTFEVVAGYLWKCVSKARYEGKSDQPTRLSTLVNCRNRITPPLPNGYAGNAAFPTVTPTCSFGEIMQKPLGYAIGNVRVALERVTREFVGSALDHIAKEKDMNLVRYNFHYPTSSVHKGPYKGNPNLFVVSWMNFSYKDADFGFGKPLYFGPGFMDAEGKAFVMNKANGDGLIVAISLEASHMDAFKKFFYGDIQEEEFPISKL* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0322 465 Gene3D - 218 453 IPR023213 -
Gso16g0322 465 PANTHER SHIKIMATE O-HYDROXYCINNAMOYLTRANSFERASE-RELATED 3 462 - -
Gso16g0322 465 Pfam Transferase family 1 451 - -
Gso16g0322 465 Gene3D - 1 209 IPR023213 -
Gso16g0322 465 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 3 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0322 Gso-Chr16 3660548 3662287 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0322 2 452 Monolignol Biosynthesis Gene Families AT5G48930 34.279 1.06e-79 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0322 K13065 - gmx:100775549 951.814