Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0321 ATGGTAACCATCCACTGTTCCCACCTGGTGGTTCCCTCCGAGCCCACGCCATCTTCAACCCTCTCACTCTCCCTCTGCGACCAAATCAAGCTCCCAAACCACGGATCTCAGCTCTACCTCTACAGCAACACCAGCATCACCCACCATCATCTCATCCACACTCTCTCAGCCTCCCTCAGTAAAGCACTCACTCACTACTACCCCTTCGCTGGCCGCCTCCGCCGCATCCCCGGCGGCCGCTTCCAGCTCCTCTGCAACGCCAGTGGAGCTGTCCTCATAGAAGCCACATGTTCAAGTCAATTCAGTTTCAAATATTTTCGCGATTTCGCTCCCGTCCACGCTGTCCCCAAAATCAACTACGATGATGTCCCCATTGAGGATGTCCCCTTGCTGGTGGCGCAGGTCACGAGGTTCCCCAACGGCTTCATCACGCTCGGTCTCTCCCTCTGTCGCGCTCTCCTCGATGGAAATTCGGCTAGCAGCTTCGTTAACTCGTGGGCCAAGCTTGCTAAAGGAGAGAACTTAGATTCCAGCTTGATTCCTTTGCTTGATCGAACCAAGTTAGATTCATTTAAACTCAATAAACCACCACGTTTTGAACACCCTGAGTTTTTGCCACCACCCCTTTTGACACAACAGCATACCCAGATGGAAGAACAACTTGGTTCGACCATATTGGAACTCACAAAGGGTCAAGTTGAGAAACTGAAGAAGAAAGCTAGTGACTTTGGAAGTGGGTATGGTATTAATAACGGTAATGGTTCCGTACGACCTTATACTAGTTTTGAGGTTATAACTGGTCACTTGTGGAGGTGTGTTTGCAAGGTGCGTTACGCGGGTGGTGATTTGGGTCAACCAACGAGGTTGACCACTTTGGTTAACTGTAGAAACCGTTTAAGGCCTTCTCTCCCCACGGCTTATTTTGGGAATGCAACGTTTCCCACGGTGACACCAACTTGTTCCTTTGATGAGATCATGCACAAGCCTCTGAGCTATGCTGTGGGGAAAGTGAGGGAAGCGATTGGGAAGATGAGTGATGAGTATGTGAGGTCTGCGCTTGATTACATAGCAAGTGTGGAGGACTTCGATTTGTTCAGGGACACGTTTTATGGTTCTGGTGATGGGAAAGGGAAGTTTAAGGGAGATCCTAATTTGTATATGGTTGGTTGGACGAATTTTAAGTATTTTGAGACGGATTTTGGGTGGGGGAAACCGGTTTCTTTGATTCCCGGAAACATTAATTCTAATGGCAAGGCTTTTCTTTTGGACAATGCAAGTGGTGATGGCTTCATTGTAGCTGTTTGTTTGCTGGAATCGCATGTAGATGCTCTGAGGAAGTTGTTTTATGAGGATATGGAGGATGCTAGTTCCAAATTGTGA 1380 0.4826 MVTIHCSHLVVPSEPTPSSTLSLSLCDQIKLPNHGSQLYLYSNTSITHHHLIHTLSASLSKALTHYYPFAGRLRRIPGGRFQLLCNASGAVLIEATCSSQFSFKYFRDFAPVHAVPKINYDDVPIEDVPLLVAQVTRFPNGFITLGLSLCRALLDGNSASSFVNSWAKLAKGENLDSSLIPLLDRTKLDSFKLNKPPRFEHPEFLPPPLLTQQHTQMEEQLGSTILELTKGQVEKLKKKASDFGSGYGINNGNGSVRPYTSFEVITGHLWRCVCKVRYAGGDLGQPTRLTTLVNCRNRLRPSLPTAYFGNATFPTVTPTCSFDEIMHKPLSYAVGKVREAIGKMSDEYVRSALDYIASVEDFDLFRDTFYGSGDGKGKFKGDPNLYMVGWTNFKYFETDFGWGKPVSLIPGNINSNGKAFLLDNASGDGFIVAVCLLESHVDALRKLFYEDMEDASSKL* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0321 459 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 40 455 - -
Gso16g0321 459 Gene3D - 210 451 IPR023213 -
Gso16g0321 459 Gene3D - 1 206 IPR023213 -
Gso16g0321 459 Pfam Transferase family 1 449 - -
Gso16g0321 459 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 40 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0321 Gso-Chr16 3654949 3656746 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0321 2 450 Monolignol Biosynthesis Gene Families AT5G48930 33.261 3.42e-72 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0321 K13065 - gmx:100819383 875.544