Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0295 ATGGCAGCCTTCATCCTCATCTCCAAGTCCAAGCTTCAATCCACAGTACTTGTTCTTGTCCTAAACCTATCTTTCTTCTTCCTCTTCTGTCTCCTTCTAAAGGCTTATTATCTCCACCCTCCTAACTCAAATTCTCAATCTAATGGCCCCCTCAAAACCTTCAACCATGAAAGATTGTTCAGAGATGTTAGTGTTGAAGGCTGCACTGACCTCCACAAGTACTCAGATTATGAGTCCAAATGTTTGTATGTGAAGAGCCATCTTGACTGCAGGTCAAAAGGGTACATAAACTATCTCCAAATCTTCTATTGCAGCTTTGGGAAATTCCAAATTTTGGGACAAACCATCCTTGCCTTGTGGCTTGTGGTTTTGTTCTATCTTTTGGGAGACACAGCTTCAAACTACTTCTGCAACTCATTGGAAGGTTTGTCCAACATCTTGAGACTCTCCCCAACCATTGCAGGAGTGACGCTTCTCTCATTAGGAAATGGTGCTCCTGATTTCTTTGCCAGTGTTGTGTCTTTCACAGGATCATCCTCAAATGGTGCCGTTGGACTCAACAGCATCCTTGGAGGGTCTTTCTTTGTGTCATGTGCTGTCTTGGGGATCATAAGCATTCTTGTTGGCCCAAACCAGGTTCAAGTTGATAAGGCCAGTTTCATTAGGGATGTTCTTTTCTTCCTTTTCTCTCTTCTCATCCTTCTCATCATCCTTTACATTGGTAAAATCACTTTGTTGGCTTCAATCTGCTATGTTTCCATCTACTTTCTCTATGTCTGTGCTGTCTCAGCCACACATCTCATCTATGGAGGGGACAAAATGATTAATGAAAGGCAATACCAATACTCTGATGATGAGTCATCATCATCATCACTAGAAGCTAGCATACCTTTGTTAGGCTACGTTGATGAAGAGAAACAAAGTTTGGCAGAGATAGTGGTGGTGGTTGAAGAGAAGGACCAAAACCAAAACCAAAAGCAAGATAGTCATAGTAGTAGTACTTTTTTTGGGGGTAACAATTCATTGTTTGATTGTATTTACTTGGGAAAGATCCTACAAGTGCTAGAACTACCACTTGGCTTACCAAGAAGGCTTACAATCCCAGTGGTGAGTGAGGAGAAATGGTCAAAGCCATATGCAGTAATATCTGTCACACTAGCACCTGTTTTGTTGGCAATTCTTTTCAACACACAAAGTGAAAACGTGGGTTCAAGGAGTGGTATTGTCACATACATAGTAGCTGCATTGATTGGGATAGTTTTGGGCAACATGGCATGTGTGACAACTGAAAGGTGCAACCCACCCAGAAAGTCCTTGTTCCCTTGGCTTGCTGGTGGCTTTGCAATGAGTGTAACATGGACTTACATAATTGCTGAGGAGCTTGTTTCTCTCTTGGTATCAATTGGGAGCATCATAGGGGTTAGCCCTTCAATTCTAGGACTAACTGTCCTAGCTTGGGGTAACTCACTTGGTGACTTGATAGCCAATGGTGCCATGGCAATGAATGGTGGGCCTGATGGGGTCCAAATGGCAATTTCTGGCTGCTATGCTGGCCCAATGTTTAACACCTTGATGGGCTTGGGCTTGCCACTTGTTCTCTCAGCTTGGTCCGAGCATCCAGAACCTTATGTCACTCCTAAGGACACTTCACTCTATGAGACACTTTTGTTCTTGATGGGAGGGGTGCTTTGGGCACTTGTGATTTTGCCTAAGAAGAATATGAGGCTTGATAAATCCTTGGGAGCAGGGCTATTGAGTGTGTACATGTGTTTTTTGGTCATAAGGATAGCTATGGCAGTTGGAATTGTGAAATTTTAG 1818 0.4307 MAAFILISKSKLQSTVLVLVLNLSFFFLFCLLLKAYYLHPPNSNSQSNGPLKTFNHERLFRDVSVEGCTDLHKYSDYESKCLYVKSHLDCRSKGYINYLQIFYCSFGKFQILGQTILALWLVVLFYLLGDTASNYFCNSLEGLSNILRLSPTIAGVTLLSLGNGAPDFFASVVSFTGSSSNGAVGLNSILGGSFFVSCAVLGIISILVGPNQVQVDKASFIRDVLFFLFSLLILLIILYIGKITLLASICYVSIYFLYVCAVSATHLIYGGDKMINERQYQYSDDESSSSSLEASIPLLGYVDEEKQSLAEIVVVVEEKDQNQNQKQDSHSSSTFFGGNNSLFDCIYLGKILQVLELPLGLPRRLTIPVVSEEKWSKPYAVISVTLAPVLLAILFNTQSENVGSRSGIVTYIVAALIGIVLGNMACVTTERCNPPRKSLFPWLAGGFAMSVTWTYIIAEELVSLLVSIGSIIGVSPSILGLTVLAWGNSLGDLIANGAMAMNGGPDGVQMAISGCYAGPMFNTLMGLGLPLVLSAWSEHPEPYVTPKDTSLYETLLFLMGGVLWALVILPKKNMRLDKSLGAGLLSVYMCFLVIRIAMAVGIVKF* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0295 605 Gene3D - 149 280 IPR044880 -
Gso16g0295 605 Gene3D - 376 598 IPR044880 -
Gso16g0295 605 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 7 605 - -
Gso16g0295 605 PANTHER CATION/CALCIUM EXCHANGER 1 7 605 - -
Gso16g0295 605 Pfam Sodium/calcium exchanger protein 118 261 IPR004837 GO:0016021|GO:0055085
Gso16g0295 605 Pfam Sodium/calcium exchanger protein 443 596 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0295 Gso-Chr16 3349294 3351639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0295 39 604 Antiporters AT5G17860 48.501 7.89e-175 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0295 K13754 - gmx:100819204 1094.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso19g0990 19 37287467 37290096 Gso16g0295 16 3349294 3351639 GST
Gso7g0641 7 6827833 6832437 Gso16g0295 16 3349294 3351639 GST