Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0285 ATGTCCTTGTCTCTTTTCTTCCTTCTCATTCTCATTTTCTCTTCTTCCACTTCCTCAAGCACCACCATAATCCTCCAAGGCAATACCACTCTCAAGAGCCCCAACAACACCTTCCAATTGGGCCTCTTCTCCTTCTCCTTTTCCTTCTACCTCGCCATCCGCCACACCTCCCTCCCCTTCCCCAACACCACCTGGGTCGCCAACCGCCTCCACCCTTCCCCAACCCAAACCGGTTCAATCCTCCACTTAACCCAAACCGGTTCATTGATCCTAACCCACTCCAACACCACTCTCTGGAGCACCGCCCCCACCTTCAACACCTCATCAAACCTCTCCCTCAAGCTTCTCGACTCCGGTAACCTAATCCTCTCTGCCCCCAACGGCCTCGTTCTATGGCAGAGCTTCGATTCCCCCACCGACACGTGGCTCCCCGGCATGAATCTAACTCGCTTCAACTCTCTAACCTCCTGGCGAACCCAAACCGACCCGACTCCAGGACTCTACTCTCTGCGGCTAAAGCCACCGTTCTTTGGCGAATTCGAGCTCGTCTTTAACGACACCGTTTCTTACTGGTCCACCGGAAACTGGACCGACGGAAAATTCCTCAACATCCCCGAAATGTCCATCCCTTACTTATACAGCTTCCACTTTCTCTCCCCTTTCTCCCCCGCCGCGGAGTTTGGATTCTCCGAACGCGCGTCGGAGACCGGAACCCAACCTCCGACGATGTTCCGTGTGGAGCCGTTCGGACAAATCCGGCAGTACACGTGGAACAACCAAGCAGGCTCCTGGAAAATGTTTTGGTCCATGCCCGAACCCGTTTGCCAGGTTCGCGGACTCTGCGGAAGGTTCGGAGTTTGCATTGGAGAAACTTCGAAGCTGTGTGAGTGTGTCAGTGGGTTTGAGCCTCTGGATGGTGATGGGTGGGGTTCTGGTGATTATTCGAAAGGGTGTTACCGTGGGGACGCGGGGTCTGATGGGAGTGATGGGTTTCGAGATCTGGGGGATGTGAGGTTTGGGTTTGGGAATGTGAGTTTGATCAAGGGGAAATCTAGAAGCTTTTGTGAGGGGGAGTGTTTGAGGGATTGTGGGTGTGTTGGGTTGAGTTTTGACGAAGGGAGTGGGGTGTGTAGGAATTTTTATGGGTTGCTTTCGGATTTTCAGAATTTGACTGGTGGTGGTGAAAGTGGGGGTTTTTATGTTAGGGTTCCAAAGGGGGGATCTGGTGGGAGGAAGAAGGTGTTTGATAGGAAGGTTTTGAGTGGGGTTGTGATTGGAGTTGTTGTGGTTTTGGGGGTGGTGGTGATGGCTTTGTTGGTGATGGTGAAGAAGAAGAGGGGTGGTGGAAGAAAGGGGTTGGAGGAGGAGGAGGAAGATGGGTTTGTGCCTGTGTTGAATTTGAAGGTGTTTTCTTACAAGGAGCTTCAGTTGGCGACGCGCGGGTTTTCGGAGAAGGTTGGGCATGGAGGGTTTGGGACTGTGTTTCAAGGGGAGTTGAGTGATGCTTCGGTTGTGGCGGTGAAGAGGTTGGAGAGGCCGGGGGGTGGGGAGAAGGAGTTCAGGGCTGAGGTGTCCACAATTGGGAACATTCAGCATGTGAATCTTGTGAGGCTGAGAGGGTTTTGCTCTGAGAATTCTCATAGGCTTTTGGTTTATGAGTATATGCAGAACGGTGCCCTTAATGTTTATTTGAGAAAGGAAGGGCCTTGTTTGAGTTGGGATGTTAGGTTTAGGGTTGCTGTTGGGACTGCTAAGGGGATTGCTTATTTACATGAGGAGTGTAGGTGTTGCATCATACATTGTGATATCAAGCCCGAGAACATTCTTTTGGATGGGGATTTCACTGCCAAGGTTTCGGATTTCGGGCTGGCAAAGCTCATCGGGAGAGACTTCAGCAGGGTGTTGGTGACCATGAGGGGGACGTGGGGGTATGTTGCGCCAGAGTGGATTTCCGGAGTGGCGATTACCACCAAGGCGGATGTTTACAGCTATGGAATGACGTTGCTGGAGCTAATTGGCGGTCGGAGGAATGTGGAGGCGCCTCTGTCTGCTGGAGGAGGAGGAGGTGGTGGAGAGAGTGGTGATGAGATGGGAGGGAAGTGGTTCTTCCCGCCATGGGCCGCGCAGAGGATAATCGAGGGGAATGTGAGTGATGTGATGGATAAGAGGCTTGGGAATGCGTATAACATTGAGGAGGCTAGGAGGGTTGCTTTGGTTGCAGTTTGGTGCATTCAAGATGATGAGGCAATGAGACCTACAATGGGTATGGTGGTGAAGATGTTGGAAGGGTTGGTGGAGGTGAGTGTTCCTCCACCACCCAAGTTGCTTCAAGCGCTGGTTACTGGGGATTCCTTTCATGGGGTGAAGGCTGATTCAGGCAATGGTGCGTCGTCTACTGGTGGAAGCTTATCTGATGGCGACTTGGAAGTGTCAACTGCTGATTCTGAATCATATACAGGGAATGTTTTTTCTCCTTTGGATGTGAATGTCAATGTTAGTGTTCGATAA 2508 0.5183 MSLSLFFLLILIFSSSTSSSTTIILQGNTTLKSPNNTFQLGLFSFSFSFYLAIRHTSLPFPNTTWVANRLHPSPTQTGSILHLTQTGSLILTHSNTTLWSTAPTFNTSSNLSLKLLDSGNLILSAPNGLVLWQSFDSPTDTWLPGMNLTRFNSLTSWRTQTDPTPGLYSLRLKPPFFGEFELVFNDTVSYWSTGNWTDGKFLNIPEMSIPYLYSFHFLSPFSPAAEFGFSERASETGTQPPTMFRVEPFGQIRQYTWNNQAGSWKMFWSMPEPVCQVRGLCGRFGVCIGETSKLCECVSGFEPLDGDGWGSGDYSKGCYRGDAGSDGSDGFRDLGDVRFGFGNVSLIKGKSRSFCEGECLRDCGCVGLSFDEGSGVCRNFYGLLSDFQNLTGGGESGGFYVRVPKGGSGGRKKVFDRKVLSGVVIGVVVVLGVVVMALLVMVKKKRGGGRKGLEEEEEDGFVPVLNLKVFSYKELQLATRGFSEKVGHGGFGTVFQGELSDASVVAVKRLERPGGGEKEFRAEVSTIGNIQHVNLVRLRGFCSENSHRLLVYEYMQNGALNVYLRKEGPCLSWDVRFRVAVGTAKGIAYLHEECRCCIIHCDIKPENILLDGDFTAKVSDFGLAKLIGRDFSRVLVTMRGTWGYVAPEWISGVAITTKADVYSYGMTLLELIGGRRNVEAPLSAGGGGGGGESGDEMGGKWFFPPWAAQRIIEGNVSDVMDKRLGNAYNIEEARRVALVAVWCIQDDEAMRPTMGMVVKMLEGLVEVSVPPPPKLLQALVTGDSFHGVKADSGNGASSTGGSLSDGDLEVSTADSESYTGNVFSPLDVNVNVSVR* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0285 835 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-2 13 821 - -
Gso16g0285 835 CDD B_lectin 24 138 IPR001480 -
Gso16g0285 835 SUPERFAMILY Protein kinase-like (PK-like) 463 762 IPR011009 -
Gso16g0285 835 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 13 821 - -
Gso16g0285 835 SUPERFAMILY alpha-D-mannose-specific plant lectins 49 196 IPR036426 -
Gso16g0285 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 598 610 IPR008271 GO:0004672|GO:0006468
Gso16g0285 835 Gene3D Phosphorylase Kinase; domain 1 453 554 - -
Gso16g0285 835 SMART blect_4 22 138 IPR001480 -
Gso16g0285 835 Pfam Protein kinase domain 483 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0285 835 ProSiteProfiles Protein kinase domain profile. 480 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0285 835 ProSitePatterns Protein kinases ATP-binding region signature. 486 508 IPR017441 GO:0005524
Gso16g0285 835 Pfam D-mannose binding lectin 64 150 IPR001480 -
Gso16g0285 835 PIRSF SRK 1 816 IPR024171 GO:0004674
Gso16g0285 835 Gene3D Transferase(Phosphotransferase) domain 1 555 769 - -
Gso16g0285 835 CDD STKc_IRAK 486 764 - -
Gso16g0285 835 CDD PAN_AP_plant 324 404 - -
Gso16g0285 835 SMART serkin_6 480 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0285 835 ProSiteProfiles Bulb-type lectin domain profile. 16 136 IPR001480 -
Gso16g0285 835 Pfam S-locus glycoprotein domain 191 303 IPR000858 GO:0048544
Gso16g0285 835 Gene3D - 15 136 IPR036426 -
Gso16g0285 835 MobiDBLite consensus disorder prediction 791 811 - -
Gso16g0285 835 MobiDBLite consensus disorder prediction 790 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0285 Gso-Chr16 3227303 3230084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0285 470 771 Receptor kinase-like Gene Family AT5G20050 46.032 9.30e-83 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso16g0285 Pkinase 1.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0285 - - gmx:100778917 1415.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0601 7 6369085 6371951 Gso16g0285 16 3227303 3230084 GST