Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso16g0283 | ATGACATCTCCTTATACTCCTCGCCGGCGATCCAGCTCCGACCACCGCACCAGGCCAGAAAGAGCGCCCCCCTCCCCCGGTTACGCCTCCTCCGAGTTCAGCACCTCCTCCACCGTCTCCGCCCACCGGAACTCCGTCTCCGCCGTCGCCAAGTCCTTCGCCGGAATCTTTGCCGGGTGCTTCTCCCCGCCGGATTCCGACAACTCCAAGAGCCTCGGGGATTCCGAGGAGTTCAAGTCTTCTTCCACTGTATCAAATGCTTCCAGAGCTGGTAGTCAGAGAGGGCATGGCTCGAAACGAGGTACCAGCATCAGTTCATACAACATATTACCAGCGAAAGAACCAGGCAGTGTTGAGTTCACCATGGAGGAAATCTTCCGAGTCACAAGAAACTTCTCCCCTTCTTTCAAGATTGGCCAAGGTGGTTTTGGTGCTGTCTATAGGGCCAAACTCCTGGATGGGACTGTTGTTGCAGTAAAGCGTGCTAAGAAGAGTGTGTATGAGAAACATTTGGGGGTGGAGTTCCAGAGCGAGATCCAAACACTATCACGTGTGGAACATTTGAACTTGGTCAAGTTCTTTGGATATTTGGAGCAAGAGGATGAAAGGATCATTGTTGTGGAGTATGTTCCAAATGGAACCCTTAGAGAGCATTTAGATTGCATTCATGGAAGCGTTCTGGACCTTGCTGCACGTTTAGATATAGCAATTGATGTTTCTCATGCTATTACCTATCTTCATATGTATATAGATCATCCTATCATTCACAGAGACATAAAATCTTCGAACATTCTTCTCACTGAAAATTTTCGAGCTAAGGTAGCAGACTTTGGTTTTGCTAGACAAGCCCCTGACAGTGACTCTGGCATGACACATGTTTCCACCCAAGTAAAAGGAACAGCTGGTTACTTGGACCCTGAATACCTGAAAACTTATCAACTAACTGAAAAGAGTGACGTGTATTCATTTGGAGTTTTGCTTGTTGAACTTGTCACAGGAAGACGCCCCATTGAACCAAAATTTGAACTCAGGGAGCGAATCACGGCAAGATGGGCTATGAAGAGGTTCATTGAGGGAGATGCTATCTCAGTCTTGGACCCAAGACTGGACCAGATTGCTGCAAATACTTTAGCACTAGAAAAGATCCTTGAGCTAGCTTTACAGTGCTTGGCTCCACGTAGACAAAGTAGGCCAACTATGAAGAGATGTGCTGAGATCCTTTGGTCCATCCGCAAGGATATCAGAGAGCAGCTATCCGCTTCAAATTTCCGCTCATTTTCCACTTCTTCCCAAAGAAGCACCTCATTGAAAGAGTGA | 1317 | 0.4746 | MTSPYTPRRRSSSDHRTRPERAPPSPGYASSEFSTSSTVSAHRNSVSAVAKSFAGIFAGCFSPPDSDNSKSLGDSEEFKSSSTVSNASRAGSQRGHGSKRGTSISSYNILPAKEPGSVEFTMEEIFRVTRNFSPSFKIGQGGFGAVYRAKLLDGTVVAVKRAKKSVYEKHLGVEFQSEIQTLSRVEHLNLVKFFGYLEQEDERIIVVEYVPNGTLREHLDCIHGSVLDLAARLDIAIDVSHAITYLHMYIDHPIIHRDIKSSNILLTENFRAKVADFGFARQAPDSDSGMTHVSTQVKGTAGYLDPEYLKTYQLTEKSDVYSFGVLLVELVTGRRPIEPKFELRERITARWAMKRFIEGDAISVLDPRLDQIAANTLALEKILELALQCLAPRRQSRPTMKRCAEILWSIRKDIREQLSASNFRSFSTSSQRSTSLKE* | 439 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso16g0283 | 438 | ProSiteProfiles | Protein kinase domain profile. | 132 | 409 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso16g0283 | 438 | CDD | STKc_IRAK | 138 | 407 | - | - | |
Gso16g0283 | 438 | PANTHER | RECEPTOR-LIKE PROTEIN 55 | 8 | 427 | - | - | |
Gso16g0283 | 438 | Pfam | Protein kinase domain | 137 | 405 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso16g0283 | 438 | ProSitePatterns | Protein kinases ATP-binding region signature. | 138 | 164 | IPR017441 | GO:0005524 | |
Gso16g0283 | 438 | SUPERFAMILY | Protein kinase-like (PK-like) | 106 | 410 | IPR011009 | - | |
Gso16g0283 | 438 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Gso16g0283 | 438 | MobiDBLite | consensus disorder prediction | 66 | 108 | - | - | |
Gso16g0283 | 438 | Gene3D | Transferase(Phosphotransferase) domain 1 | 210 | 432 | - | - | |
Gso16g0283 | 438 | SMART | serkin_6 | 132 | 409 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gso16g0283 | 438 | PANTHER | CALMODULIN-BINDING RECEPTOR-LIKE CYTOPLASMIC KINASE 2 | 8 | 427 | - | - | |
Gso16g0283 | 438 | Gene3D | Phosphorylase Kinase; domain 1 | 95 | 209 | - | - | |
Gso16g0283 | 438 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 254 | 266 | IPR008271 | GO:0004672|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso16g0283 | Gso-Chr16 | 3206761 | 3211371 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso16g0283 | 116 | 400 | Receptor kinase-like Gene Family | AT1G79620 | 45.329 | 5.72e-71 | 239 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-IV | Gso16g0283 | Pkinase | 3e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso16g0283 | - | - | gmx:100305435 | 818.15 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso7g0598 | 7 | 6347610 | 6351997 | Gso16g0283 | 16 | 3206761 | 3211371 | GST |