Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0275 ATGAAAGTTGAAGTAGAAATCATTTCTAGAGAAGACATTAGGCCTTCTTCTCCCACACCCTCTCACCTGAGAGTCTTCAATCTTTCCCTTTTGGATCACCTCATTCCATCACCATATGCTCCCATAATCCTATACTACACCTCACCCAACAGTGACAAAACTTGCCTCTCTGAAGTCCCCAAGAGGTTAGAATTGCTGAAAAAATCTTTATCGGAGACACTAACCCAATTCTATCCTCTTGGTGGCAAAATCAAAGAATTAGACTTTTCCATTGAGTGCAATGATGAAGGTGCCAATTTTGTGCAAGCCAAAGTGAAGTGTCCTCTTGATAAATTTCTAGTCCAACCTCAGTTGACCTTACTTCACAAGTTTCTTCCCACTGATCTTGTTTCTGAAGGATCAAATTCAGGAACCTATGTGACTAACATTCAGGTAAACATCTTTGAATGTGGAGGAATTGCCATTGGCTTGTGCATTTCTCATAGAATCCTAGATGGGGCTGCACTAAGCACCTTTATAAAAGGGTGGTCAGAAAGAGCCAAGGGTTTTAATTGTGACCAATTAACCAAACCAAACTTTATAGGATCTGCTCTCTTCCCCACAAACAACAATCCATGGCTTAGAGACTTATCAATGCGCATGTGGGGTTCTTTTTTCAAACAAGGCAAGTGGGTAACAAAGAGGTTTCTCTTTAGAAACTCAGATATAGCCAAACTCAAGGCTCAAACATTAGGGACAGCAACTTCCACACGTTTGGAGATAGTTTCTTCCATGTTGTGGAAGTCCCTCATGGGTGTGTCTAAAGTACGGTTTGGCACACAAAGGCCTTCTTTGGTGACTCATTTGGTGAACCTTAGGAGGAGAATGGATGAGGCTCTTTGTCCTCAACATGCAATGGGAAATCTTCTTTGGTTGGTGGCTGCGGAGAAAATGTGTGATGATCATGATGAGATGGGGTTGGAGGACTTGGTGGGGAAGTTGAGGAAATCAATATCACAAGTTGATGAAAAATTTGTTGAAGAATTGAGAGGTGATAAGGGAAGGTCAATTATGAAGGAGAGTCTTGGGGCAATAAGTGAGAAGGGATCAAAGGGTGAAGTAGTGGATTATGTTGGGTTTAGTAGTTGGTGCAATTTTGGGTATTATGAGGCTGATTTTGGGTGGGGAAAGCCCACTTGGGTGAGTGGTGTTGGTTCAATTGGTTCAGTTTCAATGTTTATGAATCTCATCATCCTAGTGGATACAAGGCTGGGAGATGGCATAGAAGCTTGGGTTACCTTGGATGAGGAGGACATGACTCATTTGGAAGCAAATACTGAACTCCTCACTTGTGCAACACTTGATCCAAGTCCTTTAACAATGAGTTGA 1368 0.4203 MKVEVEIISREDIRPSSPTPSHLRVFNLSLLDHLIPSPYAPIILYYTSPNSDKTCLSEVPKRLELLKKSLSETLTQFYPLGGKIKELDFSIECNDEGANFVQAKVKCPLDKFLVQPQLTLLHKFLPTDLVSEGSNSGTYVTNIQVNIFECGGIAIGLCISHRILDGAALSTFIKGWSERAKGFNCDQLTKPNFIGSALFPTNNNPWLRDLSMRMWGSFFKQGKWVTKRFLFRNSDIAKLKAQTLGTATSTRLEIVSSMLWKSLMGVSKVRFGTQRPSLVTHLVNLRRRMDEALCPQHAMGNLLWLVAAEKMCDDHDEMGLEDLVGKLRKSISQVDEKFVEELRGDKGRSIMKESLGAISEKGSKGEVVDYVGFSSWCNFGYYEADFGWGKPTWVSGVGSIGSVSMFMNLIILVDTRLGDGIEAWVTLDEEDMTHLEANTELLTCATLDPSPLTMS* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0275 455 Gene3D - 1 206 IPR023213 -
Gso16g0275 455 Pfam Transferase family 4 441 - -
Gso16g0275 455 Gene3D - 222 445 IPR023213 -
Gso16g0275 455 PANTHER VINORINE SYNTHASE-LIKE 5 454 - -
Gso16g0275 455 PANTHER F21J9.9 5 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0275 Gso-Chr16 3110522 3112535 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0275 3 436 Monolignol Biosynthesis Gene Families AT5G48930 25.275 2.02e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0275 - - gmx:100305374 897.116