Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0238 ATGGGAAACAGTGAGGAAGAGAAATCTGTTAAAACTGGAAGTCCTTCTTCTTCACCTGCAACAACTGAGCAGACCAACCAACCTAATATTCACGTCTATCCTGATTGGGCTGCCATGCAGTATTATGGGCCAAGAGTCAACATTCCACCATACTTCAACTCAGCTGTGGCTTCTGGTCATGCTCCACACCCATACATGTGGGGGCCGCCACAGCCTATGATGCAACCTTATGGGCCACCTTATGCAGCATTTTATTCGCATGGAGGGGTTTATACTCACCCTGCAGTTGCTATTGGGCCACACTCACATGGTCAAGGAGTTCCATCTTCACCTGCTGCTGGGACTCCTTCAAGCGTAGAATCACCAACCAAATTCTCTGGAAATACTAATCAGGGTTTAGTGAAGAAATTGAAAGGGTTTGATGAGCTTGCAATGTCAATAGGCAATTGCAATGCTGAGAGTGCTGAGCGAGGAGCTGAAAACAGGCTGTCACAGAGTGTGGATACTGAGGGTTCCAGCGACGGAAGTGATGGCAACACTGCAGGGGCTAATCAAACAAAAAGGAAAAGAAGCCGAGAAGGAACACCGATCACTGATGCAGAAGGGAAAACTGAGCTACAAAATGGTCCGGCTTCCAAAGAGACTGCATCTTCCAAAAAGATTGTGTCAGCTACCCCAGCTAGTGTTGCAGGAACATTAGTTGGACCTGTAGTTTCTTCAGGTATGGCCACAGCACTGGAGCTGAGGAACCCTTCGACTGTTCATTCTAAGGCAAATTCCACAAGTGCCGCACAACCTTGTGCAGTTGTGCGTAATGAAACTTGGTTACAGAATGAGCGTGAGCTGAAACGGGAGAGGAGAAAACAATCTAACCGTGAATCTGCTAGAAGGTCCAGGCTGAGGAAGCAGGCCGAGACTGAAGAATTGGCACGAAAAGTTGAGATGTTAACTGCTGAGAATGTGTCTCTGAAGTCAGAAATAACTCGACTGACTGAAGGTTCTGAGCAGATGAGGATGGAAAATTCTGCATTGAGGGAAAAACTGATAAATACTCAACTGGGACCAAGGGAAGAGATAACTTTGAGCAGCATTGACAGCAAGAGGGCTGCACCTGTAAGTACAGAAAACTTGTTATCAAGAGTTAACAATTCCGGATCTAATGATAGAACTGCAGAGAATGAGAATGATATCTGCGAGAACAAACCAAATTCTGGTGCAAAGCTGCATCAACTACTGGATACAAATCCTAGAGCTAATGCTGTAGCAGCTGGTTGA 1275 0.4604 MGNSEEEKSVKTGSPSSSPATTEQTNQPNIHVYPDWAAMQYYGPRVNIPPYFNSAVASGHAPHPYMWGPPQPMMQPYGPPYAAFYSHGGVYTHPAVAIGPHSHGQGVPSSPAAGTPSSVESPTKFSGNTNQGLVKKLKGFDELAMSIGNCNAESAERGAENRLSQSVDTEGSSDGSDGNTAGANQTKRKRSREGTPITDAEGKTELQNGPASKETASSKKIVSATPASVAGTLVGPVVSSGMATALELRNPSTVHSKANSTSAAQPCAVVRNETWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVEMLTAENVSLKSEITRLTEGSEQMRMENSALREKLINTQLGPREEITLSSIDSKRAAPVSTENLLSRVNNSGSNDRTAENENDICENKPNSGAKLHQLLDTNPRANAVAAG* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0238 424 Pfam bZIP transcription factor 279 341 IPR004827 GO:0003700|GO:0006355
Gso16g0238 424 MobiDBLite consensus disorder prediction 379 408 - -
Gso16g0238 424 MobiDBLite consensus disorder prediction 158 185 - -
Gso16g0238 424 MobiDBLite consensus disorder prediction 101 130 - -
Gso16g0238 424 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 286 301 IPR004827 GO:0003700|GO:0006355
Gso16g0238 424 MobiDBLite consensus disorder prediction 280 307 - -
Gso16g0238 424 Pfam Disordered region downstream of MFMR 131 258 - -
Gso16g0238 424 SUPERFAMILY Leucine zipper domain 282 337 IPR046347 GO:0003700|GO:0006355
Gso16g0238 424 CDD bZIP_plant_GBF1 284 332 IPR045314 GO:0003700|GO:0006355
Gso16g0238 424 Coils Coil 306 326 - -
Gso16g0238 424 Gene3D - 282 336 - -
Gso16g0238 424 MobiDBLite consensus disorder prediction 108 130 - -
Gso16g0238 424 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 424 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gso16g0238 424 PANTHER G-BOX-BINDING FACTOR 3 1 424 - -
Gso16g0238 424 MobiDBLite consensus disorder prediction 208 222 - -
Gso16g0238 424 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 281 344 IPR004827 GO:0003700|GO:0006355
Gso16g0238 424 MobiDBLite consensus disorder prediction 154 222 - -
Gso16g0238 424 SMART brlzneu 279 343 IPR004827 GO:0003700|GO:0006355
Gso16g0238 424 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Gso16g0238 424 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0238 Gso-Chr16 2753352 2758411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0238 1 424 bZIP Transcription Factor Family AT2G46270 49.309 1.79e-110 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso16g0238 MFMR_assoc 5.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0238 K09060 - gmx:547789 815.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0535 7 5410360 5415392 Gso16g0238 16 2753352 2758411 GST