Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0224 ATGGAACAATTTAGACAACTTGGGGAGGCACTAGGGGGTTTGAAATCTGTGATGGTATTCCGGGAGAGCATACAAATCAATCATAGGCAATGTTGTCTGCTGCTTGATGTGTTCACCTTTGCATATGAATGTATTGCAGATGAGATCATACAGAACTTGAAATTTGAAGAGAAGAATGGGAAGTGGAAGATTCTAGAACAGCCCTTGAGAGAGATCCATAAGATTTTCAGAGAAGGAGAAGCTTACATTAGGCATTGCATGGAAACAAAGGACTGGTGGGCTAAATCCATTGTCATGAGCCACAACAATGATTGTGTTGAGTTTCATATACACAACTTGCTTTGTTGCATGCCTGTTGTGATTGAAGCCATTGAGTCTGCAGGGGAAACATCAGGGTGGGATCAAGAGGAGATGCAAAGGAAGAGGCTTATCAATTCCGATAAGTATAGGAAAGAATATAGAGACATGAGGCTTTTCCAGTGGAAATTTGGGAAACAGTACCTCATCACTCAGGACTTCTGCCGCCGATATGATACGGTTTGGAAGGAAGATAGATGGTTCCTTTACAACAAAATCCATGAAAAGAAAGTGGAAGGTATATCAAAGTATGAGAAGAAATTGATAGATTTACTTTTGAGGAATTTGGAGAGATCAGAATCACTTGTAGGGAAGCTCTTGCCAAGTTCAATATTGGTTGGATCTAAGGACTATCAGGTGAGGAGAAGAATGGGGAATGCAAGTCAGTACAAGGAGATTTCATGGTTAGGTGAAAGCTTTGTCATAAGACATTTTTCTGGGGACATTGAGGCTTTGGAACCTGAGATCATAGAACTTTTATCTCTTTCCCATCCTAATATAATGGACAGCCTTTGTGGTTTTACTGATGAGGAGAAGAAGGAATGCTTTTTGGTAATGGAACTAATGAGCAAAACCCTTTCCACCCACATCAAAGAGATTCACGGTCCGCGGAAGCGAATACCGTTCTTGCTTCATGTGGCAATTGATCTCATGCTTCAGATTGCCAGGGGAATGGAGTATTTGCATTCAAAGAAAGTATATCATGGAGAACTAAACCCTTCAAGCATTCTTGTTAGGCCTAGAGGTACATCCCAAGAAGGTTACTTGCATGCCAAGGTAATGGGGTTTGGACTAACTTCTGTTAAGGACTTGACCCAGAAAGGGAACACAAATCAGAATGGAACTCCCCCATTCATCTGGTACTCTCCGGAAGTACTTGAAGAGCAAGATCATTCAGGGGGTGAAGCAAACTCCAAATACACAGAGAAATCTGATGTGTACAGTTTTGGAATGGTTTGCTTTGAGCTTCTAACTGGAAAAGTCCCTTTTGAAGATAGCCATCTCCAAGGGGAGAAAATGAGCAGAAACATAAGGGCAGGAGAGAGGCCACTTTTCCCACCCAATTCACCCAAATATGTCATTAACTTGACAAAGAGATGTTGGCATATTGATCCGCATCAACGTCCGAGCTTCGCTACCATATGTAGAGTTCTTCGTTATATAAAAAGGTTTCTTGCATTGAATCCTGGTTACAGCAATCAGCCAGAACCACCAGTGCCACCAGTAGATTACTGTGATATAGAGTCTGTGCTTCTGAGGAAGTTTCCTTCTTGGGGAGGTTCTGAATCACCATCAGTACCAATCACTCCATTTCAAATGTTTGCATATCAAGCTATAGAGCGAGAAAAAGTAAGCACAGGATGTAAGGATAACTCTGAGTCTGGAAGTGATGCTTCAGCTTGTGGTGATGAACTTGTTACTTCTGGGGATGAACCTTTTCCATCCACAGTTGAAAGGAAGTCTTTGCTTGGACATGATATTTTGAACAGAAGGATTCAATTGACCAGGAAATCTCTTGATTTGAAGCTCACCAAACAACCAGGTACACCAAAAGGGAGATTGGCCAGACCTCCACAAATGTCCCCTCGTACAAGAACTTTGAGAATTACTTCAGATAACCACATGATATCAAGTCCAAGAGCAATAAGAAGAGTATCTCCTGGTCATGTCTCAGACTCTGAGCTTTCTTAG 2049 0.4173 MEQFRQLGEALGGLKSVMVFRESIQINHRQCCLLLDVFTFAYECIADEIIQNLKFEEKNGKWKILEQPLREIHKIFREGEAYIRHCMETKDWWAKSIVMSHNNDCVEFHIHNLLCCMPVVIEAIESAGETSGWDQEEMQRKRLINSDKYRKEYRDMRLFQWKFGKQYLITQDFCRRYDTVWKEDRWFLYNKIHEKKVEGISKYEKKLIDLLLRNLERSESLVGKLLPSSILVGSKDYQVRRRMGNASQYKEISWLGESFVIRHFSGDIEALEPEIIELLSLSHPNIMDSLCGFTDEEKKECFLVMELMSKTLSTHIKEIHGPRKRIPFLLHVAIDLMLQIARGMEYLHSKKVYHGELNPSSILVRPRGTSQEGYLHAKVMGFGLTSVKDLTQKGNTNQNGTPPFIWYSPEVLEEQDHSGGEANSKYTEKSDVYSFGMVCFELLTGKVPFEDSHLQGEKMSRNIRAGERPLFPPNSPKYVINLTKRCWHIDPHQRPSFATICRVLRYIKRFLALNPGYSNQPEPPVPPVDYCDIESVLLRKFPSWGGSESPSVPITPFQMFAYQAIEREKVSTGCKDNSESGSDASACGDELVTSGDEPFPSTVERKSLLGHDILNRRIQLTRKSLDLKLTKQPGTPKGRLARPPQMSPRTRTLRITSDNHMISSPRAIRRVSPGHVSDSELS* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0224 682 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7-LIKE 1 637 - -
Gso16g0224 682 Pfam Protein tyrosine and serine/threonine kinase 269 503 IPR001245 GO:0004672|GO:0006468
Gso16g0224 682 Gene3D Transferase(Phosphotransferase) domain 1 254 514 - -
Gso16g0224 682 SUPERFAMILY Protein kinase-like (PK-like) 265 530 IPR011009 -
Gso16g0224 682 PANTHER SERINE-THREONINE PROTEIN KINASE 1 637 - -
Gso16g0224 682 ProSiteProfiles Protein kinase domain profile. 237 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0224 682 Pfam Protein of unknown function (DUF1221) 21 234 IPR010632 -
Gso16g0224 682 MobiDBLite consensus disorder prediction 659 682 - -
Gso16g0224 682 MobiDBLite consensus disorder prediction 629 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0224 Gso-Chr16 2636881 2640070 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0224 274 504 MAP Kinase Kinase Kinase AT5G58950 29.487 7.19e-24 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Gso16g0224 PK_Tyr_Ser-Thr 1.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0224 - - gmx:100813704 1388.24