Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso16g0218 | ATGGAAGAGAATATGAAGTGTGAACTAGTTGGTCTCATTGATGAGTTAATGCAAGGGAAGGAGCTAGCAAAGCAGCTTTGTGACCATCTAGTCTCATTATCATCATCATCTTCTCATGAAACAAATGAAGTCCTAATTGAGAAAATACTTTCCACCTATGAGAAAGCACTTGCCATGCTGAATTGCAAGGCTAATGTAGGAGAAAGTAAGGCCAACATTAATGGCAGCATGATGGATTCCCCTTGTTCTTTCACAAATGGTAGCCCCAAAAGTGAGGTCATGGAGCCTGAGATTAAGAACAAAGATGTCTTTAAGAAAAGAAAGACCATGTCAACGTGCACAGAACAAGTGAAGGTGTGCTTGGGAACGGCGCATGAAGGATCTCTGGATGATGGCTATAGTTGGAGAAAATATGGACAGAAGGATATTCTCGGAGCTAAGTTTCCAAGAGGATATTACAGATGCACATATAGAAATGTACAAGGATGTCTGGCCACAAAGCAGGTGCAAAAGTCAGATGAAGACCCAATGATATGTGAAATAACCTACAAAGGAAGACACACATGCACCCAAGCAAGTCACTTAAACAAAACAGTGATACCCCCATCAAAGACAAAGGTGAACTTGTTGGGAGAAAATAAGCACCAAACCCATCAAATTAAGAATCAACCACGGCAAGAGAAAATAGAACAACAACCACCAGAGACATTTTTCACATTTGGATCATCATCAGGTCTTGAAGTTAAAATAGAGGACATCGACCACAAGGAGGGCATATTCCCATCATTTTGCTTTTCTTCTCCATCAATAGTAGGGTCAGAAAATGGGGACGACAACAACAGCAGCATATTCTCATACACCATGATTGAGAACAACTTAATGGAAAGCTTCTCTCCTGCCTTCATATCTCCAACAACTTCAGATATAGAATCAAACACTTTCTGCCACTGGGGGAGCACTGGACTAGGCCAAAGTGTGCAAAGCTCAGGGTCTGATATCACTGATATAGTTTCAGCACCAACTTCAGTCACCAATTCACCAATAATGGACCTTGATTTCTTTTTCGATAAGATCGATTTCGACACAGATTTCCCTTTGAGCACCATGGAACTTTGCACTTAA | 1122 | 0.41 | MEENMKCELVGLIDELMQGKELAKQLCDHLVSLSSSSSHETNEVLIEKILSTYEKALAMLNCKANVGESKANINGSMMDSPCSFTNGSPKSEVMEPEIKNKDVFKKRKTMSTCTEQVKVCLGTAHEGSLDDGYSWRKYGQKDILGAKFPRGYYRCTYRNVQGCLATKQVQKSDEDPMICEITYKGRHTCTQASHLNKTVIPPSKTKVNLLGENKHQTHQIKNQPRQEKIEQQPPETFFTFGSSSGLEVKIEDIDHKEGIFPSFCFSSPSIVGSENGDDNNSSIFSYTMIENNLMESFSPAFISPTTSDIESNTFCHWGSTGLGQSVQSSGSDITDIVSAPTSVTNSPIMDLDFFFDKIDFDTDFPLSTMELCT* | 374 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso16g0218 | 373 | PANTHER | WRKY TRANSCRIPTION FACTOR 46-RELATED | 1 | 370 | - | - | |
Gso16g0218 | 373 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 1 | 370 | IPR044810 | GO:0003700 | |
Gso16g0218 | 373 | SUPERFAMILY | WRKY DNA-binding domain | 127 | 191 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gso16g0218 | 373 | Pfam | WRKY DNA -binding domain | 130 | 189 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso16g0218 | 373 | SMART | WRKY_cls | 129 | 191 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Gso16g0218 | 373 | Gene3D | WRKY domain | 113 | 192 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Gso16g0218 | 373 | ProSiteProfiles | WRKY domain profile. | 124 | 187 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso16g0218 | Gso-Chr16 | 2548225 | 2551457 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso16g0218 | 12 | 367 | WRKY Transcription Factor Family | AT2G46400 | 35.440 | 1.04e-48 | 164 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Gso16g0218 | WRKY | 7.6e-26 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso16g0218 | - | - | gmx:100170747 | 734.561 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso7g0510 | 7 | 5150137 | 5153078 | Gso16g0218 | 16 | 2548225 | 2551457 | ECH | |
Gso1g1913 | 1 | 55842036 | 55843963 | Gso16g0218 | 16 | 2548225 | 2551457 | ECH | |
Gso16g0218 | 16 | 2548225 | 2551457 | Gso16g0218 | 16 | 2548225 | 2551457 | ECH | |
Gso7g0510 | 7 | 5150137 | 5153078 | Gso16g0218 | 16 | 2548225 | 2551457 | GST | |
Gso19g2141 | 19 | 49934076 | 49936828 | Gso16g0218 | 16 | 2548225 | 2551457 | PCT | |
Gso3g2188 | 3 | 47074111 | 47077041 | Gso16g0218 | 16 | 2548225 | 2551457 | PCT | |
Gso16g0218 | 16 | 2548225 | 2551457 | Gso19g2141 | 19 | 49934076 | 49936828 | PCT | |
Gso16g0218 | 16 | 2548225 | 2551457 | Gso3g2188 | 3 | 47074111 | 47077041 | PCT |