Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0210 ATGATACCAGTCTCACTTGAAAAGTCGGATGAGAATGGAGAACTACGTTCTTATGCTTCCTGGCTAGGAAAACATCCTTCTGCCTTGGGAAATTTTGAGGAGGTGATGACCATTGCTGAAGGGAAACAAATTGTTGTGTTTTTGGACTATGATGGAACACTCTCACCGATTGTAGATGACCCTGACAAGGCTTACATGAGTGATGTTATGCGTGCAGCTGTATGTGAAGTTGCCAATTGTTTTCCCACTGCCATTGTTAGTGGAAGGAGCAAGGATAAGGTATATGAATTTGTGAAGTTAGAGAATGTTTACTATGCTGGAAGTCATGGTATGGACATATCAACACCATCAGGCTCTTCAAAATATGAAGAGCAGGAGCATCAGATAAAGGCTGTTGATGAAAAGGGTAATCCCGTTGTTCACTGTCATCCGGCAATAGAATTTTTGCCAACAATCCAAGAGATAGTTAAGGTTTTGAAAGAAAATACAAGAAGAATAAAGGGCTCTATGATTGAGGATAATACATTCTGTGTCACTGTACACTACCGGTGTGTGAAAAATGAAGAGGAAGTTGGTGTTCTCAAAGAAATGGTAAAGACTATTATGAAAGCTTACCCCGATTTTTACATATCAGGAGGAAGAAAGGTTATGGAGATACGTCCAACTGTAAACTGGGACAAAGGTCGTGCTCTTACATATTTGCTTGACACTCTTGGCTTTGACAACTTCAGCAATGTTCTTCCAATGTACCTTGGGGATGATAGAACAGATGAAGATGCTTTTAAGGTATCGTTTGTTAAAACAGATGCCTTATTTTTTAGAGTTTAG 828 0.3949 MIPVSLEKSDENGELRSYASWLGKHPSALGNFEEVMTIAEGKQIVVFLDYDGTLSPIVDDPDKAYMSDVMRAAVCEVANCFPTAIVSGRSKDKVYEFVKLENVYYAGSHGMDISTPSGSSKYEEQEHQIKAVDEKGNPVVHCHPAIEFLPTIQEIVKVLKENTRRIKGSMIEDNTFCVTVHYRCVKNEEEVGVLKEMVKTIMKAYPDFYISGGRKVMEIRPTVNWDKGRALTYLLDTLGFDNFSNVLPMYLGDDRTDEDAFKVSFVKTDALFFRV* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0210 275 TIGRFAM T6PP: trehalose-phosphatase 42 263 IPR003337 GO:0003824|GO:0005992
Gso16g0210 275 Gene3D - 46 264 IPR023214 -
Gso16g0210 275 Gene3D - 126 222 - -
Gso16g0210 275 Pfam Trehalose-phosphatase 47 263 IPR003337 GO:0003824|GO:0005992
Gso16g0210 275 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 263 IPR044651 GO:0004805|GO:0005992
Gso16g0210 275 SUPERFAMILY HAD-like 45 264 IPR036412 -
Gso16g0210 275 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 263 - -
Gso16g0210 275 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 46 263 IPR006379 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0210 Gso-Chr16 2464183 2469964 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0210 46 262 Trehalose Biosynthesis Gene Families AT1G60140 26.339 1.86e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0210 K01087 - gmx:100799466 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g0210 16 2464183 2469964 Gso16g0210 16 2464183 2469964 ECH