Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0207 ATGTTGACGATGATGATCATCACTGCGCTCATCACTGCCATAATTGCGGGACTTTGCATTGGTCCGATCAACGGCCGGCGGCGGAGGAAGAGAGCCGTGGGGTTCTTCCATCCGTACACCAACGACGGCGGCGGCGGGGAGAGGGTGCTGTGGTGCGCCGTGAGAGGCATCCAGGAGGAAAGCCCCGACCTTGATTGCTATGTGTACACCGGAGATCATGACGCCACCCCTCAATCGCTCATGGCTCGTGCCCTCGATCGCTTTGGGGTCACGCTCCTCTCTTCTCCAAAGGTGGTTCTTTTGTACAAGAGAAAGTGGATTGAAGAGACTACTTATCCGCACTTTACCATGATTGGTCAAAGTCTGGGTTCTGTGTATCTTGCATGGGAGGCTTTGTGCAAGTTTACCCCAATGTATTACTTTGACACAAGTGGATATGCTTTTACATACCCACTTGCTCGGTTGTTTGGATGCAAAGTTATTTGCTATACACATTATCCTACTATCAGCTCAGACATGTTAGCTCGTGTTCGTCAGCACAGCTTCATGTATAATAACGATGCCTTAATTACAAAAAGTGTTTGGCTTTCAAGGTGCAAAATAGTCTATTATACAGTATTCAGCTGCTTGTATGGATTTGTAGGATCTTGTGCACACCTAGCTATGGTCAATTCATCTTGGACTAAATCCCATATTGAAAATCTTTGGAGATTTCCTGACCGTATTAAGCGAGTCTATCCTCCTTGTGATACTTCTGGACTCCAGGTACTTCCCTTGGAACGATCAGCAGAAATTCCTGTATTAATATCTGTTGCACAATTTCGACCGGAGAAGGCACACACTCTCCAACTTGAGGCTTTTTCAGCTGCCATTAAGAGATTAGATCCTACCTTGCCAAAACCTAAGTTCCAAATTGTGGGTAGCTGTAGAAATAAATCAGATGAAGACAGACTTCAAATGTTAAAGGAGAAAGCAATTGAGCTGAATGTGAATGAACATGTAGAATTTCATAAGAATGTAACATACAGAGATTTGGTGGGACTTTTAGGGGGTGCTGTTGCTGGCATTCATTCAATGACAGATGAGCATTTTGGCATTAGTGTGGTAGAATACATGGCTGCTGGTGCCATTCCAATTGCTCATAATTCTGCTGGCCCAAAAATGGACATTGTATTAGATGAAGATGGACAGCAAACAGGATTTCTTGCCTGCACTGTTGAAGAATATGCAGATGCCATGGTGAGAATTGTATCGATGTCGGAGATGGAGAGACTAAAGATGGCTGCAGCCGCAAGGAGACAGGCGAGGAGGTTTTCCGAGCAGAGGTTTTATGATGACTTCAAAGCTGCAGTGCGTCCTATCCTGTCTCATACTTCTAGGTGA 1383 0.4519 MLTMMIITALITAIIAGLCIGPINGRRRRKRAVGFFHPYTNDGGGGERVLWCAVRGIQEESPDLDCYVYTGDHDATPQSLMARALDRFGVTLLSSPKVVLLYKRKWIEETTYPHFTMIGQSLGSVYLAWEALCKFTPMYYFDTSGYAFTYPLARLFGCKVICYTHYPTISSDMLARVRQHSFMYNNDALITKSVWLSRCKIVYYTVFSCLYGFVGSCAHLAMVNSSWTKSHIENLWRFPDRIKRVYPPCDTSGLQVLPLERSAEIPVLISVAQFRPEKAHTLQLEAFSAAIKRLDPTLPKPKFQIVGSCRNKSDEDRLQMLKEKAIELNVNEHVEFHKNVTYRDLVGLLGGAVAGIHSMTDEHFGISVVEYMAAGAIPIAHNSAGPKMDIVLDEDGQQTGFLACTVEEYADAMVRIVSMSEMERLKMAAAARRQARRFSEQRFYDDFKAAVRPILSHTSR* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0207 460 Gene3D Glycogen Phosphorylase B; 254 438 - -
Gso16g0207 460 Coils Coil 311 331 - -
Gso16g0207 460 PANTHER GDP-MAN:MAN(3)GLCNAC(2)-PP-DOL ALPHA-1,2-MANNOSYLTRANSFERASE 22 455 IPR038013 GO:0004377
Gso16g0207 460 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 32 454 - -
Gso16g0207 460 CDD GT4_ALG11-like 31 446 IPR038013 GO:0004377
Gso16g0207 460 Pfam ALG11 mannosyltransferase N-terminus 31 236 IPR031814 -
Gso16g0207 460 Pfam Glycosyl transferases group 1 266 432 IPR001296 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0207 Gso-Chr16 2401987 2407124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0207 218 443 Glycosyltransferase AT1G78800 26.923 2.30e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0207 K03844 - gmx:100801617 909.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0500 7 5029888 5035970 Gso16g0207 16 2401987 2407124 GST