Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0183 ATGAATTCTGGTGCTGTCTTGGCATTGCCTCCAGTAAGCAATGTATTCAGGACAAGGGAACCTCATGATTTTGAGGATGACTTTGTGGAGAAAGATCCAACTGGCCGGTACATAAGGTACAATGAAATCTTGGGTAGAGGTGCCTTCAAAACCGTTTATAGGGGTTTTGATGAAGTTGATGGAATAGAAGTTGCTTGGAACCAAGTTAAGATTGATGGCCTCATGCATTCAGTAGATGATCTTGCGAAATTGTATTCTGAAGTTAATCTATTGAAGTCTTTGAAACATGAAAATATCATTAAGTTCTATGATTCTTGGATTGATGATAAGCAGAAAACTGTTAACATGATTACTGAACTCTTCACATCAGGAAATTTAAGGCTATATCGTAAGAAGCATAAATATGTTGAAATGAAAGCTATAAAAGGTTGGGCCAGGCAGATCCTTCATGGCTTAGTATATCTTCACAGTCACAGGCCACCCATTATTCACAGAGACTTGAAATGTGACAACATCTTTGTGAATGGAAACCAAGGTGAAGTTAAGATAGGGGACCTTGGTTTAGCAGTTGTCATGCAACAACCAACTGCCCAAAGTGTTATTGGGACTCCTGAGTTTATGGCTCCAGAACTATATGAAGAGGCATACACTGAACTTGTTGACATCTATTCTTTTGGGATGTGCATATTGGAGATGGTTACTCTTGAATATCCCTATAGTGAATGCAAAAATCCTGCTCAAATCTTTAAGAAAGTTACCTCAGGCATCAAACCTGCTTCCCTTAATAAGGTGAGTGATCCCCAACTTAAGGAGTTTATTGAGAAATGTTTGGTTCCAGCATCTGAGAGATTGTCAGCAGAGGAGCTTCTTAAAGACCCATTTCTACAAGTTGAGAATCCAAAGGATCCCATCCTTTATCCTTTACAACCGCCTAGCCGAACACTGAGAGCATATTCATTCAAGTCTGGTTCTCTATCTATGGACATGGATTCTGACTGCAAACCGTTTTCTATGAGTATCTGTTCTGAAAGCAACCAGGAAAACCCACATTGTCCTGTTTTTGAAGTGCAGCGGACAAATAATAAACACGAGTTTAGGTTGAAAGGGACTAAAAATGATGATAACTCGGTATCATTGACCTTGCGTATTGCTGATACATGTGGTCGAGTCCGGAATATACATTTTCTCTTTTACCTTGATACAGATACTGCAGTCTCTGTGGCCACAGAGATGGTTGAACATTTGGAGCTGGCAGATCATGATGTAGATTTCATAGCTGAGCTTATTGATTACTTGATAATGAAACTTCTACCTTGGTGGAAGCCCTCACCTGATCATTTCTCATGTGGAGAATTAAGTCCTTATAGTACAAATATAGATGGCCAATGGCCATGGGGTTCTGTCCTAACTAGTATTCCCTCTGAATTGGCTATTGATCAGGATGGCTTCTCTGGGTCTGATACAACTCCCAAAGAAGATTTTGTTGCATCTGAGAAGAGCAGCGTTTCCAAAAATGATAGCAATGCTACTTTTGAGGGTGATTGTAATTCTTCTAGTCTGGTTAAATTGGAAGATCGATATTCACAAGGATCTAGAGCTTCTGAGATGATTGTTGAAAACACTTCTATGAAAAATGACAATTGTCATGATTCCAATGCTGATGTAAGTTCTGAAAGCTTAAGTAATTCCATGTCTGAACTTGAGATTGGGGGTGCATATTTTGAGGACTGTAAATTGCAACCAGCAGAATATTGTTCTGGAGAAGGAGTTGTGATAAATGAATTCCCAAAGAACTCAGGGTCAGTTCTTGGAACGTCCATTAATGTTGAGAACCCTACAAATAGTTGTTCTTATGTGTCATCAACAGAAGAGGACATTATTGATCTTGAGCTACAGTTTAAACTTGATGAAATTGAGGCACACTATCAGCATTGGATTGATGAACTTAAGAAAATGATGTTGGAGGCATTGGATTCCACCAGAAGGAGTTGGGTGGCCAAGAAGAAATTGGCTGTTCAGTGA 2022 0.3937 MNSGAVLALPPVSNVFRTREPHDFEDDFVEKDPTGRYIRYNEILGRGAFKTVYRGFDEVDGIEVAWNQVKIDGLMHSVDDLAKLYSEVNLLKSLKHENIIKFYDSWIDDKQKTVNMITELFTSGNLRLYRKKHKYVEMKAIKGWARQILHGLVYLHSHRPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAVVMQQPTAQSVIGTPEFMAPELYEEAYTELVDIYSFGMCILEMVTLEYPYSECKNPAQIFKKVTSGIKPASLNKVSDPQLKEFIEKCLVPASERLSAEELLKDPFLQVENPKDPILYPLQPPSRTLRAYSFKSGSLSMDMDSDCKPFSMSICSESNQENPHCPVFEVQRTNNKHEFRLKGTKNDDNSVSLTLRIADTCGRVRNIHFLFYLDTDTAVSVATEMVEHLELADHDVDFIAELIDYLIMKLLPWWKPSPDHFSCGELSPYSTNIDGQWPWGSVLTSIPSELAIDQDGFSGSDTTPKEDFVASEKSSVSKNDSNATFEGDCNSSSLVKLEDRYSQGSRASEMIVENTSMKNDNCHDSNADVSSESLSNSMSELEIGGAYFEDCKLQPAEYCSGEGVVINEFPKNSGSVLGTSINVENPTNSCSYVSSTEEDIIDLELQFKLDEIEAHYQHWIDELKKMMLEALDSTRRSWVAKKKLAVQ* 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0183 673 Gene3D - 375 439 - -
Gso16g0183 673 SUPERFAMILY Protein kinase-like (PK-like) 40 349 IPR011009 -
Gso16g0183 673 Gene3D Transferase(Phosphotransferase) domain 1 121 300 - -
Gso16g0183 673 SMART serkin_6 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0183 673 PANTHER KINASE DOMAIN PROTEIN 2 673 - -
Gso16g0183 673 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 378 433 IPR024678 GO:0004674|GO:0005524
Gso16g0183 673 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 673 - -
Gso16g0183 673 CDD STKc_WNK 36 295 - -
Gso16g0183 673 Gene3D Phosphorylase Kinase; domain 1 22 119 - -
Gso16g0183 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Gso16g0183 673 ProSiteProfiles Protein kinase domain profile. 38 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0183 673 Pfam Protein kinase domain 41 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0183 673 Coils Coil 635 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0183 Gso-Chr16 2096151 2100509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0183 25 520 MAP Kinase Kinase Kinase AT5G41990 55.446 4.04e-174 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gso16g0183 Pkinase 4e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0183 K08867 - gmx:100809602 1360.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0477 7 4732148 4736623 Gso16g0183 16 2096151 2100509 GST