Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0172 ATGGGTTCAAAAACCAAGACTTTTACCTTTGAAGAGGTGGCTAAACACAATCACAGGAAGGATTGTTGGATTATAGTCAAAGGGAAGGTGTATGATGTCACCCCATTTTTGGATGATCATCCAGGAGGTGATGAAGTTTTAGTGACTGCAACAGAGAAGGATGCCACCACTGATTTTGAAGATATTGGCCACAGTGATTCAGCAACACAGATGATGGAAAAATACTTTGTTGGGGAGGTTGACACCAACACTCTTCCAGCACAAGTTACCAGCAACAACAGTGTACGCCAACCAACACAAGCACCACCTGCCTATAACAATCAATCTTCAGGATTTGTTGTGAAGATGTTGCAGTACATAGTGCCATTGCTGATATTGGCCTTTGCATTTGGCCTGCAGTACTATGGCAAAAAAAACAAGTCCACTGAGTCAGAAAATTGA 441 0.4218 MGSKTKTFTFEEVAKHNHRKDCWIIVKGKVYDVTPFLDDHPGGDEVLVTATEKDATTDFEDIGHSDSATQMMEKYFVGEVDTNTLPAQVTSNNSVRQPTQAPPAYNNQSSGFVVKMLQYIVPLLILAFAFGLQYYGKKNKSTESEN* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0172 146 PANTHER CYTOCHROME B5 1 139 - -
Gso16g0172 146 PRINTS Cytochrome B5 signature 30 40 IPR001199 -
Gso16g0172 146 PRINTS Cytochrome B5 signature 40 54 IPR001199 -
Gso16g0172 146 PRINTS Cytochrome B5 signature 55 62 IPR001199 -
Gso16g0172 146 PRINTS Cytochrome B5 signature 68 80 IPR001199 -
Gso16g0172 146 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 5 81 IPR001199 -
Gso16g0172 146 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 36 43 IPR018506 GO:0020037
Gso16g0172 146 PANTHER CYTOCHROME B5 ISOFORM C 1 139 - -
Gso16g0172 146 Gene3D - 1 85 IPR036400 -
Gso16g0172 146 Pfam Cytochrome b5-like Heme/Steroid binding domain 9 80 IPR001199 -
Gso16g0172 146 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 4 92 IPR036400 -
Gso16g0172 146 SMART Cyt_b5_2 8 81 IPR001199 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0172 Gso-Chr16 1983285 1988206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0172 1 139 NADPH P450 reductases AT5G53560 55.000 1.78e-56 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0172 K23490 - gmx:100305546 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0466 7 4620770 4625933 Gso16g0172 16 1983285 1988206 GST
Gso19g2176 19 50208187 50213066 Gso16g0172 16 1983285 1988206 PCT
Gso3g2215 3 47295859 47299648 Gso16g0172 16 1983285 1988206 PCT
Gso16g0172 16 1983285 1988206 Gso19g2176 19 50208187 50213066 PCT
Gso16g0172 16 1983285 1988206 Gso3g2215 3 47295859 47299648 PCT