Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0171 ATGTCAACCCACATTGAAAGCCTGTGGGTGTTGGCCTTAGCCTCAAAATGCATTCAAGAGAACATTGCATGGTCACTCTTGATCATCATGGTCACTCTCTGGCTCACCATGACCTTCTTCTACTGGTCTCACCCTGGTGGTCCTGCTTGGGGCAAATACTACTACTTTAATTACTGGAAAAAAACCACCTCAACCAACACAAACATCAACCTTAAAATGATTATCCCTGGTCCTAGAGGCTACCCTTTCATTGGGAGTATGAGTCTCATGACATCCCTCGCACACCACCGTATTGCTGCGGCGGGGGAAGCATGCAACGCCACCAGGCTCATGGCTTTTTCCATGGGTGACACACGCGCCATAGTAACGTGCAACCCCGATGTCGCTAAAGAGATTCTCAATAGTTCCACTTTTGCTGATCGTCCCATAAAGGAATCAGCTTACAGCCTCATGTTCAACCGCGCCATCGGCTTCGCCCCTTACGGCGTCTACTGGCGTACCCTCCGCCGCATCGCCGCCACGCACCTCTTCTGCCCCAAACAAATCAAAGCCTCCGAGCTCCAGCGCGCTGAAATCGCCGCCCAAATGACAAACTCATTCCGAAATCACCGTTGCAGCGGCGGTTTCGGAATCCGCAGCGTGCTCAAGAGAGCGTCACTGAACAACATGATGTGGTCGGTGTTTGGACAAAAGTACAACCTTGACGAGATAAACACCGCAATGGACGAGCTATCCATGTTGGTGGAACAAGGCTATGACTTGTTGGGCACCCTTAATTGGGGAGACCATATCCCTTTCCTGAAAGACTTTGACCTACAGAAAATCCGGTTCACCTGCTCCAAATTAGTCCCTCAAGTGAACCGGTTCGTTGGTTCAATCATCGCCGACCACCAGGCCGACACAACCCAAACCAACCGCGATTTCGTTCATGTTTTGCTCTCTCTCCAAGGTCCCGATAAATTGTCTCACTCCGACATGATTGCTGTCCTCTGGGAAATGATATTTAGGGGGACCGACACGGTGGCGGTTTTGATTGAGTGGATACTGGCGAGGATGGTGCTTCATCCGGAGGTGCAAAGGAAGGTACAAGAGGAGTTGGACGCGGTGGTTAGGGGTGGCGCTTTGACGGAGGAGGTCGTGGCGGCGACGGCGTATCTTGCGGCGGTGGTGAAAGAGGTTCTGAGGCTGCACCCGCCGGGCCCGCTTCTCTCGTGGGCCCGCTTGGCCATCACTGATACGACCATTGATGGGTATCACGTGCCTGCGGGGACCACCGCTATGGTTAATATGTGGGCCATAGCAAGGGACCCGGAGGTGTGGCTGGACCCACTTGAGTTCAAGCCCGAGAGGTTCATGGGTCTGGAAAACGAGTTTTCTGTTTTCGGGTCGGATCTGAGACTCGCTCCATTCGGTTCGGGTCGGAGAACATGCCCCGGGAAGACTTTGGGTTTGAGCACCGTAACCTTCTGGGTGGCTTGGCTTTTGCATGAGTTTGAATGGCTACCGTCTGATGAAGCCAAGGTTGATCTAACGGAGGTGCTGAGGCTCTCGTGTGAAATGGCTAACCCACTCATTGTTAAAGTTCGCCCTAGGCATGGATTAAGCACTTAA 1611 0.5276 MSTHIESLWVLALASKCIQENIAWSLLIIMVTLWLTMTFFYWSHPGGPAWGKYYYFNYWKKTTSTNTNINLKMIIPGPRGYPFIGSMSLMTSLAHHRIAAAGEACNATRLMAFSMGDTRAIVTCNPDVAKEILNSSTFADRPIKESAYSLMFNRAIGFAPYGVYWRTLRRIAATHLFCPKQIKASELQRAEIAAQMTNSFRNHRCSGGFGIRSVLKRASLNNMMWSVFGQKYNLDEINTAMDELSMLVEQGYDLLGTLNWGDHIPFLKDFDLQKIRFTCSKLVPQVNRFVGSIIADHQADTTQTNRDFVHVLLSLQGPDKLSHSDMIAVLWEMIFRGTDTVAVLIEWILARMVLHPEVQRKVQEELDAVVRGGALTEEVVAATAYLAAVVKEVLRLHPPGPLLSWARLAITDTTIDGYHVPAGTTAMVNMWAIARDPEVWLDPLEFKPERFMGLENEFSVFGSDLRLAPFGSGRRTCPGKTLGLSTVTFWVAWLLHEFEWLPSDEAKVDLTEVLRLSCEMANPLIVKVRPRHGLST* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0171 536 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506|GO:0016705
Gso16g0171 536 Gene3D Cytochrome P450 62 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0171 536 PANTHER CYTOCHROME P450 78A7-RELATED 1 533 - -
Gso16g0171 536 PANTHER CYTOCHROME P450 78A6 1 533 - -
Gso16g0171 536 PRINTS P450 superfamily signature 336 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0171 536 PRINTS P450 superfamily signature 388 399 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0171 536 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0171 536 PRINTS P450 superfamily signature 477 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0171 536 SUPERFAMILY Cytochrome P450 75 531 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0171 536 PRINTS E-class P450 group I signature 218 236 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0171 536 PRINTS E-class P450 group I signature 325 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0171 536 PRINTS E-class P450 group I signature 345 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0171 536 PRINTS E-class P450 group I signature 387 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0171 536 PRINTS E-class P450 group I signature 429 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0171 536 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0171 536 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g0171 536 Pfam Cytochrome P450 76 507 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0171 Gso-Chr16 1971267 1973581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0171 1 532 Cytochrome P450 AT2G46660 63.822 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0171 K20619 - gmx:100815292 1086.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0465 7 4609972 4612128 Gso16g0171 16 1971267 1973581 GST