Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0169 ATGGGTATTGGAGAGAAGAGTCCAAGCAAGAGTTTCAATCTGCACCATCACCATCATCGTGAAGGGAAGAATAAGCAACAAGAGTTCAGAGGGGTCCCAAAAGGGTGCATGGCAATTAAGGTTGGTCAAGGAGAAGAGCAACAAAGGTTCGTAGTGCCTGTGATTTACATCAACCACCCTCTCTTCATGCAGCTTCTCAAAGAGGCAGAGGAAGAGTATGGCTTTGATCAAAAGGGCACCATCACCATCCCTTGCCATGTTGAGGAATTCAGAAACGTTCGTGGCTTGATTGATAGGGACAAGTCCCTTCATCATCATCACCACCACCATGTTGGGTGTTTTGGCTTCTGA 351 0.4672 MGIGEKSPSKSFNLHHHHHREGKNKQQEFRGVPKGCMAIKVGQGEEQQRFVVPVIYINHPLFMQLLKEAEEEYGFDQKGTITIPCHVEEFRNVRGLIDRDKSLHHHHHHHVGCFGF* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0169 116 PANTHER SMALL AUXIN-UP RNA-RELATED 24 111 - -
Gso16g0169 116 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 111 IPR003676 GO:0009733
Gso16g0169 116 Pfam Auxin responsive protein 26 93 IPR003676 GO:0009733
Gso16g0169 116 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0169 Gso-Chr16 1887363 1888364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0169 32 91 Calmodulin-binding Proteins AT5G20810 55.000 6.65e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0169 - K14488 gmx:111188139 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0463 7 4531751 4532741 Gso16g0169 16 1887363 1888364 GST
Gso19g2178 19 50251602 50252237 Gso16g0169 16 1887363 1888364 PCT
Gso16g0169 16 1887363 1888364 Gso19g2178 19 50251602 50252237 PCT