Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0168 ATGGGCCAGTGCTACGGCAAAACCAATCTCGCGCCGGAAAATGACGCCACCGCCGCCACCACAGACGAGACCACCGCGGTTGTCGCCCGATCCGGCGAAGTCCCGCCCTCTCCGCTGCCGGGAAAGGGCACGCCCCCGCGGGACAGCCTCTGGTCTAGTCCCTACCCTCACGGCGGCGGCGGAGTGACGCCGTCACCTGCGAGGGGCACGCCGAGGAGGTTTTTCCGGCGGCCGTTCCCGCCGCCGTCTCCGGCGAAGCACATAAGGGCGTCGCTGGCGAAGCGGCTCGGGCACGCGAAGGCGGCGCCGAAGGAGGGGCCGATCCCGGAGGAGGAAGCGGCGGCGGCCGCGGCAGAGCGGTCGCTGGATAAGAGCTTTGGGTATGGCAAAAATTTTGGGGCAAAATTCGAAATTGGGAAAGAAGTGGGGCGAGGGCATTTCGGTCATACTTGCTATGCTAAGGGGAAGAAGGGTGAACTCAAAGATCAACCTGTTGCTATTAAAATCATTTCCAAGGCCAAGATGACCACTGCAATAGCAATTGAAGATGTTCGCAAAGAGGTGAAGATATTAAAAGCTCTATCTGGCCATAAACATCTCATCAAGTTTCATGATGCTTTTGAGGATGGCAACAATGTGTACATAGTTATGGAATTGTGTGAAGGTGGGGAGCTTCTTGACAGAATTTTGTCAAGGGGAGGAAAGTATTCAGAGGAGGATGCTAAGGTTATAGTTTTGCAGATCCTAAGCGTAGTTGCTTTTTGTCATCTTCAAGGTGTTGTACACCGTGACTTAAAACCTGAGAATTTCCTCTACACTTCCAGAAGTGAAGATGCTGACATGAAGTTGATTGATTTTGGTCTTTCTGACTTCATCCGGCCAGATGAACGACTGAATGACATTGTCGGGAGTGCATATTATGTTGCACCTGAGGTCCTTCACAGGTCATATAGTCTGGAAGCAGATATATGGAGTATTGGTGTTATTACCTATATCTTATTATGTGGAAGTCGACCTTTCTATGCACGAACAGAATCTGGAATTTTTCGTGCAGTGCTTAGAGCTGATCCTAACTTTGATGATTTACCTTGGCCTACTGCTTCTGCTGAGGCCAAGGACTTTGTGAAACGGCTCCTAAACAAGGACTACAGGAAAAGAATGACAGCTGTCCAAGCTCTAACTCATCCTTGGTTGAGGGATGACAGCCGTCCCATCCCTTTAGATATATTAATTTTTAAACTAGTGAAGGCTTATCTTCATGCAACACCATTCAAACGTGCAGCAGTGAAGGCCCTTTCAAAAGCCTTGCCAGAGGATCAATTGCCCTACCATAGTGCACAATTCAGAATGTTGGAACCAAATAGAGACGGGCGCATCTCCCTCGACAATTTCAAAATGGCTCTTTTACGCAATGCAACTGATGCCATGAGGGAGTCAAGGGTTCTTGAGATCATAAATACGATGGAGCCACTTGCCTATAGAAAGATGGACTTTGAAGAATTTTGTGCAGCTACAATCAGCACACATCAATTGGAAGCACATGATAGGTGGGAAGATATTGCCTCAACTGCTTTTGAACATTTTGAGAGAGAAGGCAACCGTCTGATATCAGTTGAAGAACTAGCCAGAGAGTTGAATCTTGGGCCTTCAGCTTATTCAGTTCTCAAAGATTGGATAAGAAATACTGATGGAAAGCTTAGTTTACTTGGATATACAAAATTTTTGCATGGTGTGACTCTCCGTAGTTCAAACCCAAGACAACACCGGTAG 1770 0.4814 MGQCYGKTNLAPENDATAATTDETTAVVARSGEVPPSPLPGKGTPPRDSLWSSPYPHGGGGVTPSPARGTPRRFFRRPFPPPSPAKHIRASLAKRLGHAKAAPKEGPIPEEEAAAAAAERSLDKSFGYGKNFGAKFEIGKEVGRGHFGHTCYAKGKKGELKDQPVAIKIISKAKMTTAIAIEDVRKEVKILKALSGHKHLIKFHDAFEDGNNVYIVMELCEGGELLDRILSRGGKYSEEDAKVIVLQILSVVAFCHLQGVVHRDLKPENFLYTSRSEDADMKLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFYARTESGIFRAVLRADPNFDDLPWPTASAEAKDFVKRLLNKDYRKRMTAVQALTHPWLRDDSRPIPLDILIFKLVKAYLHATPFKRAAVKALSKALPEDQLPYHSAQFRMLEPNRDGRISLDNFKMALLRNATDAMRESRVLEIINTMEPLAYRKMDFEEFCAATISTHQLEAHDRWEDIASTAFEHFEREGNRLISVEELARELNLGPSAYSVLKDWIRNTDGKLSLLGYTKFLHGVTLRSSNPRQHR* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0168 589 MobiDBLite consensus disorder prediction 13 27 - -
Gso16g0168 589 Gene3D Phosphorylase Kinase; domain 1 130 225 - -
Gso16g0168 589 SUPERFAMILY Protein kinase-like (PK-like) 129 419 IPR011009 -
Gso16g0168 589 CDD STKc_CAMK 135 397 - -
Gso16g0168 589 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Gso16g0168 589 PANTHER SERINE/THREONINE-PROTEIN KINASE 62 582 - -
Gso16g0168 589 ProSitePatterns Protein kinases ATP-binding region signature. 142 168 IPR017441 GO:0005524
Gso16g0168 589 Pfam Protein kinase domain 136 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0168 589 Gene3D - 416 506 - -
Gso16g0168 589 Gene3D Transferase(Phosphotransferase) domain 1 226 409 - -
Gso16g0168 589 SMART serkin_6 136 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0168 589 MobiDBLite consensus disorder prediction 1 116 - -
Gso16g0168 589 PANTHER CDPK-RELATED KINASE 3 62 582 - -
Gso16g0168 589 Gene3D - 422 567 - -
Gso16g0168 589 SUPERFAMILY EF-hand 424 577 IPR011992 -
Gso16g0168 589 ProSiteProfiles Protein kinase domain profile. 136 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0168 Gso-Chr16 1868403 1876650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0168 70 582 EF-hand Containing Proteins AT3G50530 63.437 0.0 709
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gso16g0168 Pkinase 1e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0168 - - gmx:100792058 1108.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0462 7 4508031 4515855 Gso16g0168 16 1868403 1876650 GST