Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g0165 ATGAGCGGGAAGCAGGCCGTGAGACCTCGTACCCGCGTGGGAAAGTACGAGCTGGGAAAAACCATTGGCGAGGGAAGCTTTGCTAAGGTCAAGTTCGCTAAGAACGTTGAGAATGGTAACCATGTTGCCATCAAAATCCTTGATCGTAACCATGTCCTCCGCCACAAGATGATGGAACAGCTGAAGAAAGAAATTTCTGCGATGAAGATGATCAATCATCCAAACGTTGTCAAAATTTACGAGGTGATGGCAAGCAAAACAAAGATCTATATTGTCCTAGAGTTGGTTAATGGAGGAGAACTATTTAACAAAATAGCTAAAAATGGGAAACTTAAAGAGGATGAAGCAAGAAGATATTTCCATCAATTAATCAATGCCGTTGATTATTGCCACAGCAGAGGCGTGTACCACAGAGATTTGAAGCCAGAGAATCTTCTTCTGGACTCAAATGGTGTTCTGAAAGTTACAGATTTTGGATTGAGTACATATGCACAACAGGAGGATGAACTTCTCCGAACTGCTTGTGGAACTCCAAATTATGTTGCTCCTGAGGTGCTTAATGATAGAGGTTATGTTGGTTCTACATCTGATATCTGGTCATGTGGAGTCATCCTCTTTGTGCTTATGGCCGGGTATTTGCCCTTTGATGAGCCAAATCATGCGGCACTGTACAAAAAAATTGGCAGGGCCCAATTTACATGTCCATCATGGTTTTCTCCTGAGGCAAAGAAACTATTGAAGCTTATTCTTGATCCAAACCCTCTAACAAGGATAAAAGTTCCTGAACTCTTAGAAGATGAATGGTTCAAAAAAGGATACAAACAAGCAACTTTTATAATGGAAGAGGATATCAATGTAGATGATGTTGCTGCTGCTTTCAATGATTCTAAGGAAAATCTTGTGACAGAGAGAAAAGAGAAACCCGTGTCAATGAATGCTTTTGAGCTCATATCTAGGTCACAAAGCTTCAACCTTGAAAATTTGTTTGAGAAGCAGCAAGGGTCTGTTAAGAGAGAAACACATTTTACCTCACAGCGCCCTGCAAATGAAATCATGTCAAAAATTGAGGAAGCTGCCAAGCCTCTGGGATTTAATGTTCACAAGCGAAATTATAAGATGAAGCTGCAAGGTGATAAGAGTGGAAGGAAGGGTCACCTTTCAGTTGCTACAGAGGTTTTTGAAGTGGCTCCCTCCTTGCACATGGTGGAGCTGCGAAAGACCGGGGGTGACACACTAGAGTTTCACAAGTTCTACAAAAACTTTTCATCATCATCAGGGTTGCAAGACGTTGTGTGGCATTCTGAAGAAAAACAATGA 1317 0.4153 MSGKQAVRPRTRVGKYELGKTIGEGSFAKVKFAKNVENGNHVAIKILDRNHVLRHKMMEQLKKEISAMKMINHPNVVKIYEVMASKTKIYIVLELVNGGELFNKIAKNGKLKEDEARRYFHQLINAVDYCHSRGVYHRDLKPENLLLDSNGVLKVTDFGLSTYAQQEDELLRTACGTPNYVAPEVLNDRGYVGSTSDIWSCGVILFVLMAGYLPFDEPNHAALYKKIGRAQFTCPSWFSPEAKKLLKLILDPNPLTRIKVPELLEDEWFKKGYKQATFIMEEDINVDDVAAAFNDSKENLVTERKEKPVSMNAFELISRSQSFNLENLFEKQQGSVKRETHFTSQRPANEIMSKIEEAAKPLGFNVHKRNYKMKLQGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKFYKNFSSSSGLQDVVWHSEEKQ* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g0165 438 Gene3D Transferase(Phosphotransferase) domain 1 96 296 - -
Gso16g0165 438 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Gso16g0165 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Gso16g0165 438 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 10 435 - -
Gso16g0165 438 PANTHER - 10 435 - -
Gso16g0165 438 ProSiteProfiles Protein kinase domain profile. 16 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0165 438 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Gso16g0165 438 Gene3D Kinase associated domain 1, KA1 305 433 - -
Gso16g0165 438 SUPERFAMILY Protein kinase-like (PK-like) 13 310 IPR011009 -
Gso16g0165 438 CDD CIPK_C 312 423 - -
Gso16g0165 438 Gene3D Phosphorylase Kinase; domain 1 6 95 - -
Gso16g0165 438 Pfam NAF domain 308 368 IPR004041 GO:0007165
Gso16g0165 438 SMART serkin_6 16 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g0165 438 Pfam Protein kinase domain 16 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g0165 Gso-Chr16 1807879 1815074 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g0165 1 435 CBL-interacting serine-threonine protein kinases AT1G01140 73.933 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gso16g0165 Pkinase 4.4e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g0165 - - gmx:100791002 880.167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0458 7 4448379 4455889 Gso16g0165 16 1807879 1815074 GST