Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso16g0161 | ATGGGGAAGAAGGGAAGTGGTAGTTCGTGGTTAACCGCTGTCAAAAGGGCATTCAGATCTCCCACCAAAGACAGTGACAAAAGAAGTGGCAGAAGAAGAGAAGACTGTGATCAAGAAGAAGACGAAGAAAAGAAGAGGGAAAAGAGAAGATGGATTTTCAGGAAGACTCACATGAGTCACGAAGGAGTGAACAACAACAGCAACCACACTACTCAACAAAAGGTGCAGCATGATGTGGCAGCAAGTGGGGGTGGTTCAAGGACAGACCAGGATCAGAAGCATGCACTTGCTGTGGCCATGGCCACCGCAGAAGCCGCCATGGCCACCGCTCAGGCGGCGGCGGAGGTGGCAAGGTTGTCCAAACCTGCTAGCCATGCCAGGGAGCATTTTGCTGCTGTTGTGATCCAAACTGCTTTCAGAGGGTATCTTGCTAGAAGAGCGCTTCGTGCACTGAAGGGGTTGGTGAAGTTGCAAGCTTTGGTTAGGGGTCACAATGTTAGGAAGCAGGCAAAGATGACCCTTAGGTGCATGCAGGCTTTGGTTAGAGTTCAAGCAAGGGTTCTTGACCAACGCATAAGGTCTTCACTTGAAGGTAGTAGAAAATCCACTTTCAGTGACACTGCTAGTGTTTGGGACTCACGGTATCTTCAGGACATTTCAGATAGGAAATCAATATCAAGAGAGGGAAGCAGCATTGCAGATGACTGGGATGAAAGGCATCATTCAGTTGAAGAAGTGAAGGCCATGTTGATGCAGAGGAAGGAAGCTGCTGCAATGAAGAGGGACAAGACCTTATCTCAAGCCTTTTCCGAACAGATTTGGAGGAATGGTAGAACATCATCAATTGGAAATGAAGATGAGTTGGAAGAGAGACCAAAATGGCTAGATCGGTGGATGGCCACAAAGCCATGGGAGAATAGAGGAAGGGCTTCAACTGATCAAAGAGACCCCATTAAGACTGTGGAAATTGACACATCTCAGCCTTATTCATATCTAGGAACCAATTACAGAAGATCACATCCAAATTATCAATACAACCCAAACCATCACCAACCACAAAGGCATTCCATTGCTTCCCCACTCCATAGATCTCACCAAAATGGATCCTCCCTTCACCAATCCCCTGCCACCCCTTCTCCTGCCAAATCAAGGCCTATCCAAGTCCGGTCGGCTAGTCCACGTTGCGTTAGAGACGACAGAAGCTACCACACCTCCCAAACACCAAGCTTGAGGTCTAATTACCACTACACAGGAAACTTGTACCAAAATGGAAGGATTGTTTCAACTGGAACTAGTAGTGGTGGTGCTACTGCTACATTGCCTAATTACATGGCGGCAACTGAGTCTGCAAAGGCTCGAATTCGGTCGCAAAGCGCGCCGAGGCAGAGGCCATCCACACCAGAGAGGGACAGGGTTGGATCAGCAAAGAAAAGGCTTTCTTTTCCTGCTCCTGACCCTTATGGTGTGGGAGTGAGTTATGGAAACTATGGACATAGTTTAAGGAGTCCAAGCTTCAAGAGTGTGAGTGGATCACACTTTGGAGGGTTAGAGCAACAATCAAACTACTCCTCTTGCTACACTGAGAGTATTGGTGGTGGTGGTGGTGAGGTTTCTCCTTCTTCAACTGGTGACCTTAGGAGGTGGTTGAGATGA | 1653 | 0.4797 | MGKKGSGSSWLTAVKRAFRSPTKDSDKRSGRRREDCDQEEDEEKKREKRRWIFRKTHMSHEGVNNNSNHTTQQKVQHDVAASGGGSRTDQDQKHALAVAMATAEAAMATAQAAAEVARLSKPASHAREHFAAVVIQTAFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQARVLDQRIRSSLEGSRKSTFSDTASVWDSRYLQDISDRKSISREGSSIADDWDERHHSVEEVKAMLMQRKEAAAMKRDKTLSQAFSEQIWRNGRTSSIGNEDELEERPKWLDRWMATKPWENRGRASTDQRDPIKTVEIDTSQPYSYLGTNYRRSHPNYQYNPNHHQPQRHSIASPLHRSHQNGSSLHQSPATPSPAKSRPIQVRSASPRCVRDDRSYHTSQTPSLRSNYHYTGNLYQNGRIVSTGTSSGGATATLPNYMAATESAKARIRSQSAPRQRPSTPERDRVGSAKKRLSFPAPDPYGVGVSYGNYGHSLRSPSFKSVSGSHFGGLEQQSNYSSCYTESIGGGGGEVSPSSTGDLRRWLR* | 551 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso16g0161 | 550 | MobiDBLite | consensus disorder prediction | 321 | 386 | - | - | |
Gso16g0161 | 550 | MobiDBLite | consensus disorder prediction | 1 | 89 | - | - | |
Gso16g0161 | 550 | Pfam | Protein of unknown function (DUF4005) | 392 | 496 | IPR025064 | - | |
Gso16g0161 | 550 | MobiDBLite | consensus disorder prediction | 59 | 89 | - | - | |
Gso16g0161 | 550 | MobiDBLite | consensus disorder prediction | 451 | 483 | - | - | |
Gso16g0161 | 550 | PANTHER | IQ-DOMAIN 5-RELATED | 6 | 550 | - | - | |
Gso16g0161 | 550 | MobiDBLite | consensus disorder prediction | 19 | 57 | - | - | |
Gso16g0161 | 550 | SMART | iq_5 | 127 | 149 | IPR000048 | GO:0005515 | |
Gso16g0161 | 550 | SMART | iq_5 | 150 | 171 | IPR000048 | GO:0005515 | |
Gso16g0161 | 550 | ProSiteProfiles | IQ motif profile. | 128 | 156 | IPR000048 | GO:0005515 | |
Gso16g0161 | 550 | MobiDBLite | consensus disorder prediction | 305 | 414 | - | - | |
Gso16g0161 | 550 | PANTHER | PROTEIN IQ-DOMAIN 1-LIKE ISOFORM X1 | 6 | 550 | - | - | |
Gso16g0161 | 550 | MobiDBLite | consensus disorder prediction | 305 | 320 | - | - | |
Gso16g0161 | 550 | MobiDBLite | consensus disorder prediction | 524 | 550 | - | - | |
Gso16g0161 | 550 | Gene3D | - | 125 | 180 | - | - | |
Gso16g0161 | 550 | Pfam | IQ calmodulin-binding motif | 131 | 149 | IPR000048 | GO:0005515 | |
Gso16g0161 | 550 | Pfam | IQ calmodulin-binding motif | 155 | 171 | IPR000048 | GO:0005515 | |
Gso16g0161 | 550 | ProSiteProfiles | IQ motif profile. | 152 | 179 | IPR000048 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso16g0161 | Gso-Chr16 | 1755890 | 1759154 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso16g0161 | 10 | 550 | IQD Protein Family | AT4G00820 | 57.014 | 3.83e-179 | 514 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso16g0161 | - | - | gmx:100799284 | 1036.56 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Gso7g0456 | 7 | 4431631 | 4434916 | Gso16g0161 | 16 | 1755890 | 1759154 | GST |