LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso16g0158	ATGGCTACCATGATTCGTCTTTGTCTTTGCTTCTCCATCATAGTCCTTCACCTTGTCTCCAGAATGGCTCAATCTGAAAATTATATCATCCACATGGACTCATCATCCATGCCCAAACTATTCTCCACCAAACACAATTGGTATCTGTCAACCCTTTCTTCTGCACTAGAAAATACTCATGTTACAACCAATGATAATATTCTCAACACTGCTTCCTCTAAGCTGATTTATACCTACACCAACGTCATGAATGGTTTTAGTGCAAATTTGTCACCTAATGAACTTGAAGCCCTCAAAAACTCCCCGGGTTACATTTCTTCCACACTAGATCTGCAAGCCAAGCTTCACACCACACACTCACCCCAATTCCTTGGCCTCAATCCCAAAATAGGGGCATGGCCTGCTTCGAAATTCGGCGAAGATGTCATTGTTGGGTTGGTGGACAGTGGACTTTGGCTAGAAAGTGAAAGCTTCAAAGATGAAGGGATGACTGAAATTCCTTCACGGTGGAAAGGCCAATGTGAAAGTAGCATCAAATGCAACAACAAACTCATAGGAGCTAGGCTCTTTAACAAAGGGTTCACTTTTGCCAAATACCCTAATCTCGTAACATTTGAGAACTCAACTCGAGACACAGAAGGCCACGGGACACACACATCAAGCATTGCAGTTGGAAGCCAAGTTGAGAATGCATCATTCTTTGGCTTTGCCAATGGAACAGCACAAGGAATAGCTTCAAGGGCGAGAATAGCAATGTACAAGGCCGTGTGGGATGGTAAAGCTCACTCAACTGATGTATTAGCCGCGATTGATAGTGCAATATCAGATGGTGTTGATGTTCTTTCCTTATCATTCGGCTTTGGTAATATAAGCATGTACAGTGACCCCATTGCTATAGCCACGTTTGCAGCCATGGAGAAAGGCATTTTTGTGTCCACATCAGCAGGGAATTCTGGCCCTGATCGTGGAACTCTAAATAGTGCAATACCATGGGTCATAAACGTTGGTGCTAGCACTTTGGATCGTGAATTTCGAGGGACTCTTGCTCTTGGCAATGGAGTCAACATACCTGGCTTGTCACTCTACCTAGGAAACTTCTCCGCCCACCAAGTTCCTATTGTTTTTATGGACTCGTGTGACACTTTGGAGAAACTTGCCAATGCGAGTGGCAAGATTGTGGTTTGTAGTGAAGATAAGAATAATGTGCCACTGTCATTTCAAGTGTATAATGTGCATTGGTCAAATGCTGCCGCGGGAGTCTTCATATCTAGCACGATTGACACGTCGTTTTTCTTAAGGAATGGTTCTGCAGGCATCATTATTAACCCGGGAAATGGACAAATTGTCAAAGCTTACATCAAGAGTAACCCTAATGCAAAAGCATGCATGTCTTTTAAGACAACAACTTTAGCTACTAAACCAGCACCAAGTGTGGATGTTTACAGTTCTAGAGGGCCTTCAAGTAGTTGTCCATTTGTGTTGAAACCAGACATCACTGCTCCAGGTACATCAATCTTAGCTGCATGGCCTCCAAATCTTCCAGTGGCACAATTTGGGTCCCAAAACCTTTCCAGTAACTTCAATTTTTTAACTGGCACATCCATGGCATGCCCTCACGTGGCAGGTGTGGGAGCACTGTTAAGAGGAGCACACCCTGATTGGAGCCCTGCAGCTATTAGGTCAGCCATTATGACAACATCGGATATATTCGACAATACTAAGGAACTCATCAAGGACATTGCTGATGATTACAAACCAGCCTCTCCTTTAGCCTTGGGATCTGGTCATGCCAACCCCAACAAAGCCCTTGACCCTGGACTTGTTTACGATGTAGGAGTTCAAGATTATGTCAATCTTCTCTGTGCAATGAGCTCCACTCAACAGAACATCTCAATCATCACTAGATCGTCTACTAATAATTGCTCCAATCCTTCCTTGGATCTCAACTACCCTTCTTTCATTGGTTTCTTCAGTAGCAATGGTTCTTCTAATGAATCAAGGGTAGCTTGGGAATTTCAGAGAACAGTGACCAATGTTGGGGAGAAACAAACAATCTATTCTGCTAACGTTACACCCATCAAAGGGTTTAATGTTAGTGTTGTTCCAAGCAAGTTGGTGTTCAAGGAGAAGAACGAGAAGCTAAGTTATAAGTTAAGGATAGAAGGTCCAATGGTCGAAGGCTTTGGGTATCTGACTTGGACGGACATGAAGCATGCGGTGAGGAGCCCTATTGTGGTCACCAATCAGGCACCCTCAAATTCAATTTCCATATAG	2274	0.4362	MATMIRLCLCFSIIVLHLVSRMAQSENYIIHMDSSSMPKLFSTKHNWYLSTLSSALENTHVTTNDNILNTASSKLIYTYTNVMNGFSANLSPNELEALKNSPGYISSTLDLQAKLHTTHSPQFLGLNPKIGAWPASKFGEDVIVGLVDSGLWLESESFKDEGMTEIPSRWKGQCESSIKCNNKLIGARLFNKGFTFAKYPNLVTFENSTRDTEGHGTHTSSIAVGSQVENASFFGFANGTAQGIASRARIAMYKAVWDGKAHSTDVLAAIDSAISDGVDVLSLSFGFGNISMYSDPIAIATFAAMEKGIFVSTSAGNSGPDRGTLNSAIPWVINVGASTLDREFRGTLALGNGVNIPGLSLYLGNFSAHQVPIVFMDSCDTLEKLANASGKIVVCSEDKNNVPLSFQVYNVHWSNAAAGVFISSTIDTSFFLRNGSAGIIINPGNGQIVKAYIKSNPNAKACMSFKTTTLATKPAPSVDVYSSRGPSSSCPFVLKPDITAPGTSILAAWPPNLPVAQFGSQNLSSNFNFLTGTSMACPHVAGVGALLRGAHPDWSPAAIRSAIMTTSDIFDNTKELIKDIADDYKPASPLALGSGHANPNKALDPGLVYDVGVQDYVNLLCAMSSTQQNISIITRSSTNNCSNPSLDLNYPSFIGFFSSNGSSNESRVAWEFQRTVTNVGEKQTIYSANVTPIKGFNVSVVPSKLVFKEKNEKLSYKLRIEGPMVEGFGYLTWTDMKHAVRSPIVVTNQAPSNSISI*	758

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Gso16g0158	757	SUPERFAMILY	Subtilisin-like	115	607	IPR036852	GO:0004252\|GO:0006508
Gso16g0158	757	Pfam	Fibronectin type-III domain	647	746	IPR041469	-
Gso16g0158	757	Gene3D	-	620	749	-	-
Gso16g0158	757	ProSitePatterns	Serine proteases, subtilase family, serine active site.	532	542	IPR023828	-
Gso16g0158	757	Gene3D	Peptidase S8/S53 domain	141	616	IPR036852	GO:0004252\|GO:0006508
Gso16g0158	757	Gene3D	-	341	471	-	-
Gso16g0158	757	PANTHER	SUBTILISIN-LIKE PROTEASE SBT1.9	19	749	-	-
Gso16g0158	757	Pfam	Peptidase inhibitor I9	28	115	IPR010259	-
Gso16g0158	757	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	19	749	IPR045051	-
Gso16g0158	757	PRINTS	Subtilisin serine protease family (S8) signature	139	158	IPR015500	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso16g0158	Gso-Chr16	1690818	1693091	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso16g0158	1	739	Subtilisin-like Serine Gene Family	AT5G67090	44.094	0.0	597

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso16g0158	-		-	gmx:100787831	1489.17

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Gso7g0453	7	4358504	4360856	Gso16g0158	16	1690818	1693091	GST

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